Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1152 ATGTCTGTGGCAGCAGCTTCTGATTCTTCTTCTTCTTCTGAGTTAAATAACAATGATAGCAGCATATGTGATTACACTAGAATGTGCGGACCAAATGGGAACTGCGACCTTGATGAGGCACAAACTTGTGTGTGCTTGGATGGTTTCACACCAAAGTCCCCAACTGATTTTGCTTACTTGAACTTTAGACAGGGATGTGTAAGAAACAAAGCTTTGAATTGTAGCACTGATGTGTTTGTTAGGCATTCTTCGTTTAAAGAACCAAGTGGTGGTTATTCACTGTCCAACCAACAGGATTGCTTGGGAAAATGCAAGAGCGATTGTTCTTGTATGGCGTATAAAGTAATTGTCGGTGGATGCAAATTGTGGAACGGTGATTTGTTTGATGTTAGGTTGCTCAAACAGGGCGGACAAGATCTTTATATTCGAATGTCAGCTTCAGAGGAACAAGGGGAATCAGAGGCAGGTGGGAAAAAACAGGGGCGAAATGAGGGAATGGTGGTAGGAATAGTTGTGGGGAGCAGTGTTGTGATTTCCATGATAATCATCGCTTCATGGTACATGTTCAGGGAAAGAACTGCTTCAAAAGCATTGGAACATGTAAGGATTAACGAGATCGTTACTCATGACACCAATGTACAAATACTACAAATGGAAGACATGGGCCTTCCTTTGTTTGATCTGTCAAGAATAATTGTGGCCACTGATAATTTCTCCCCCATCAATAAGCTTGGAGAAGGTGGTTTTGGATCTGTTTACAAGGGTATATTAAATGATGGACAACAAATTGCTGTAAAGAGGCTTTCAAGTAGTTCTGGACAAGGTCTAAATGAATTCAAAACCGAAGTAAAGCTAATAGCTAAACTTCAACACCGTAATCTTGTAAAGCTTTTTGGATGTTGCATCCAAGAGGAGGAGAAATTACTGATATATGAATACATGCCTAATAAAAGCTTGGACTATTTTATTTTTGGTTAG 978 0.3988 MSVAAASDSSSSSELNNNDSSICDYTRMCGPNGNCDLDEAQTCVCLDGFTPKSPTDFAYLNFRQGCVRNKALNCSTDVFVRHSSFKEPSGGYSLSNQQDCLGKCKSDCSCMAYKVIVGGCKLWNGDLFDVRLLKQGGQDLYIRMSASEEQGESEAGGKKQGRNEGMVVGIVVGSSVVISMIIIASWYMFRERTASKALEHVRINEIVTHDTNVQILQMEDMGLPLFDLSRIIVATDNFSPINKLGEGGFGSVYKGILNDGQQIAVKRLSSSSGQGLNEFKTEVKLIAKLQHRNLVKLFGCCIQEEEKLLIYEYMPNKSLDYFIFG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1152 325 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 16 324 - -
Ahy18g1152 325 ProSiteProfiles PAN/Apple domain profile. 74 145 IPR003609 -
Ahy18g1152 325 Pfam S-locus glycoprotein domain 18 53 IPR000858 GO:0048544
Ahy18g1152 325 ProSitePatterns Protein kinases ATP-binding region signature. 244 266 IPR017441 GO:0005524
Ahy18g1152 325 Gene3D Phosphorylase Kinase; domain 1 198 313 - -
Ahy18g1152 325 CDD PAN_AP_plant 72 143 - -
Ahy18g1152 325 SMART ntp_6 74 144 IPR003609 -
Ahy18g1152 325 Pfam Protein tyrosine and serine/threonine kinase 242 323 IPR001245 GO:0004672|GO:0006468
Ahy18g1152 325 ProSiteProfiles Protein kinase domain profile. 238 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1152 325 SUPERFAMILY Protein kinase-like (PK-like) 213 324 IPR011009 -
Ahy18g1152 325 Pfam PAN-like domain 74 130 IPR003609 -
Ahy18g1152 325 PANTHER - 16 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1152 Ahy-Chr18 18176973 18178577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1152 139 324 Receptor kinase-like Gene Family AT4G04500 43.979 6.59e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1152 PK_Tyr_Ser-Thr 3.10E-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1152 - - ahf:112769686 610.912