Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1151 ATGTTAGATTGGTCTAAGCGCTTTAATATTATTAGCGGAATCGCTAAAGGCTTATTGTATCTTCATCAAGATTCAAGATTGAGAATTATACATAGAGATATTAAAACGAGTAATATTTTATTGGGCAGTAAGATGGAACCCAAAATATCAGACTTTGGTTTAGCTAGAAGCTTTGAAAATGGTCAAAGTAAAGGAAATACAAATAGAGTTGTTGGAACTTTTGGATATATGGCTCCAGAATATGCTGTTAATGGACACTTTTCGATAAAATCTGACGTCTTTAGCTTTGGTATTTTATTACTTGAAATTGTATCCGGGAAGAGAAATAGAAGATTATATTGTCCAAGTGACAATGATGAAAGCTTGTATGGAAACGCATGGGATTTATGGAAGCAAGGAAGGTCACTGGAGCTTGTGGATGAATGCCTCAAAGATTCATGGAATTTGAGTGAAGTACAACGTTGTATTCATATTGGCCTCCTATGTGCACAGCAAAATCCCCATGATAGGCCAATTATGTCTTATGTGGTTTTAATGTTAGGAAGTGAAATTGATTTGCCTCAACCCAAAGCTCCTAAATTTTTTATTTGTGATCCTTTTGATGGATCAAGTACCTCCATTAGTAAAAACGAATTAAGCATTACAGAGATGGAAGCTCGATAG 663 0.3499 MLDWSKRFNIISGIAKGLLYLHQDSRLRIIHRDIKTSNILLGSKMEPKISDFGLARSFENGQSKGNTNRVVGTFGYMAPEYAVNGHFSIKSDVFSFGILLLEIVSGKRNRRLYCPSDNDESLYGNAWDLWKQGRSLELVDECLKDSWNLSEVQRCIHIGLLCAQQNPHDRPIMSYVVLMLGSEIDLPQPKAPKFFICDPFDGSSTSISKNELSITEMEAR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1151 220 SUPERFAMILY Protein kinase-like (PK-like) 2 202 IPR011009 -
Ahy18g1151 220 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1151 220 ProSitePatterns Serine/Threonine protein kinases active-site signature. 29 41 IPR008271 GO:0004672|GO:0006468
Ahy18g1151 220 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 213 - -
Ahy18g1151 220 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 213 - -
Ahy18g1151 220 Gene3D Transferase(Phosphotransferase) domain 1 1 188 - -
Ahy18g1151 220 Pfam Protein kinase domain 9 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1151 220 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1151 Ahy-Chr18 18175939 18177894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1151 2 220 Receptor kinase-like Gene Family AT4G11530 52.814 9.05e-79 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1151 Pkinase 8.70E-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1151 - - aip:107610641 358.607