Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1140 ATGTCAAAGTTGTGTCAACGATATTCCGCTAGGAGGCTGAACCATTTTCTCAAGATTCATTTTCATCGAACAAGGAAATTAAGCATGGCAGAAGATCAATTTCAGGCAAGTGGAAACTGGTGGGAGAATCCAGCTATCAGGAACAATTGGCAACCGCATCAGCAACAACAAGATGAATCAGATCACATGATGAAACCAACAAGGGTTTCTATGGATTCCTCGGGTGGTGGCGCTGCCGGTGGCGGTTCGTCTTCTGTGGTGTTCCATGACCCACAGAAGCTTCAGCCTCCGGATTCTGCCGCGGCCGCCACTTCTTCCACTGACCCCAACTTGCACTTTATGGCTTTAGGCCTCTCTTCCCCGCCCATCGATTGGAATCAACAACCATCCTTCTTGCGTGGTGAGAAGGGTGGAGAGAACAGCTTCAGGTCGATGCTACAAGAAGAGGGTGGAGGCGGCGGCGGCATGGGGTTGTCAGCACAACAAGTCCATCAATGGAGATCAGCGGAAAGCGAATTCAAGAACAATAGAGGTTTCTGTTTGGAGCAAAACCAATTCAGTCCTCAATATAGCTCCGGTGACAGCACAGTAACAAGCCAACAAGGATTTCATCACCAACACATGGATCATTCCGCAGTTCTATACGGTAGCCCTTCATCAATCTTACAAGGACTATTAGGACCTGATCATCATCAACAACAAGCTAATCATAATTTTTCATATCCAACTTCAAACTATGGGTTGAGTTCTTCTAGTAGCAATGACTTTGTGCCTTCTTCTTCTTCTTCTAATTGGTCTAATAACAACAACAATAATAATAATAACAATAAAGTGCCTCAGTTCTTGAGAGGCTCGCCACCAAAACAGTTATCCAATTCCTCATCATCACCGATAACAACGACAAACACTAGTTTGCATTTCACAAACAACGCTCCTTTTTGGAACGCTGCTGCTTCTGACCCTAAAGATGTTAGGTCCACCACCTTCTTCCCTAATTCATTGCAGCCACCATTCTTCACTAATCCAAGTTTTGATGTCCAATCTAAGAATATGAGTGAAATGAGGGATTCAGGTGCAGTGGTGAAGAAAAGTGGGAGTGAACCAACACCCAAAAGGCCTCGGAACGAAACTACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTAGTGTCGCCTTTTGGAAAGACTGATACAGCCTCAGTGTTATCTGAAGCAATTGAATACATCAAATTCCTCCATGAACAGGTCACTGTTTTGAGTACCCCGTATATGAAAAGTGGAGCTCCTATACAGATTCAACAGGGTTCCGGTAAATCTAAGGAAGGTGAGGGTCCAAAACAAGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCAGTTTCAAGCACATTTCCAATGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTTGGAGGAGGTTCAAGATAG 1491 0.4474 MSKLCQRYSARRLNHFLKIHFHRTRKLSMAEDQFQASGNWWENPAIRNNWQPHQQQQDESDHMMKPTRVSMDSSGGGAAGGGSSSVVFHDPQKLQPPDSAAAATSSTDPNLHFMALGLSSPPIDWNQQPSFLRGEKGGENSFRSMLQEEGGGGGGMGLSAQQVHQWRSAESEFKNNRGFCLEQNQFSPQYSSGDSTVTSQQGFHHQHMDHSAVLYGSPSSILQGLLGPDHHQQQANHNFSYPTSNYGLSSSSSNDFVPSSSSSNWSNNNNNNNNNNKVPQFLRGSPPKQLSNSSSSPITTTNTSLHFTNNAPFWNAAASDPKDVRSTTFFPNSLQPPFFTNPSFDVQSKNMSEMRDSGAVVKKSGSEPTPKRPRNETTPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQIQQGSGKSKEGEGPKQDLRSRGLCLVPVSSTFPMTHETTVDFWTPTFGGGSR* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1140 496 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 79 484 - -
Ahy18g1140 496 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 484 - -
Ahy18g1140 496 SMART finulus 387 431 IPR011598 GO:0046983
Ahy18g1140 496 Gene3D - 386 441 IPR036638 GO:0046983
Ahy18g1140 496 MobiDBLite consensus disorder prediction 250 303 - -
Ahy18g1140 496 CDD bHLH_AtbHLH_like 382 433 IPR045239 -
Ahy18g1140 496 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 376 425 IPR011598 GO:0046983
Ahy18g1140 496 MobiDBLite consensus disorder prediction 224 243 - -
Ahy18g1140 496 MobiDBLite consensus disorder prediction 442 464 - -
Ahy18g1140 496 MobiDBLite consensus disorder prediction 341 383 - -
Ahy18g1140 496 MobiDBLite consensus disorder prediction 52 106 - -
Ahy18g1140 496 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 386 441 IPR036638 GO:0046983
Ahy18g1140 496 MobiDBLite consensus disorder prediction 226 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1140 Ahy-Chr18 17890312 17894933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1140 133 496 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 44.665 3.77e-70 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1140 - - ahf:112772433 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1140 18 17890312 17894933 Ahy18g1140 18 17890312 17894933 ECH
Ahy18g1140 18 17890312 17894933 Ahy8g1842 8 37024346 37028839 hybridization