Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1112 ATGGTTCTAGATCTTGGCTCTGCTCGAAATCCTATTAGTTTCACTTTTACTTATTTGGTGCCTGTGTGTTTTAGATGCCATTTCATCTGGCAGTATGGTTCTAGATATTTGTTCGTTAGATGTGACAATGAACCAGCTCCATGGATTGCTGATATTCTGAAAGCACTACACGACTTGCTTCCAAATCAAGCAGAGGGTAGTCAAGCTTATATACTGGACGACATTATCGACCATGTTAAATATTTGCAGCTTCAATTAAAGGAACTAAGTGGAAGTAGACTACAAGCTGAATCAACTGCTATACCACTGGTTTTCCATGAGGGTTATGGGCATTATATTGACCAGCAGAAGCTGAATGAACCACTTGAAGAGATGATGGGGAAACTTCTTGAAGAGAATCCTGCATCTGCCAGTCAGCTGCTGGAGAACAATGGTCTTGTCCTGCTGCCTATGGAGTTGGTTCAAGACTTGTACCAATCCATGCAAATCTTCGGCAACAGCAATGCACTTGTCTGA 516 0.4186 MVLDLGSARNPISFTFTYLVPVCFRCHFIWQYGSRYLFVRCDNEPAPWIADILKALHDLLPNQAEGSQAYILDDIIDHVKYLQLQLKELSGSRLQAESTAIPLVFHEGYGHYIDQQKLNEPLEEMMGKLLEENPASASQLLENNGLVLLPMELVQDLYQSMQIFGNSNALV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1112 171 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 49 154 - -
Ahy18g1112 171 CDD bHLH_AtbHLH_like 49 90 IPR045239 -
Ahy18g1112 171 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 49 154 - -
Ahy18g1112 171 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 98 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1112 Ahy-Chr18 17026313 17027887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1112 49 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 37.838 1.74e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1112 - - ahf:112769661 348.977