Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1086 ATGGATTCACAACAGCTATATAGTTTTGGTGTGACAAGTGCAGGACTACCTTATATTCCATCCTTCCCCGCAATTCCGTCGTCGCAACCCAACAGGCTTCTTGGATCCTTGAAATTTGACACTGGGAACTCGCCCAATTCCCCCTTTTCGACTCATTTTGATTCTGATACTCTTTCAGCTTTTAGTGATAGCCAGGACCAGCAGCACAGCCCTGGAGAAATCCTATCCGGCGTCAGCACCTCGTGCAACTCGCCTTTCGAAACCAATCATTACTTGCATACATCAGTCTCGTCTGCAGACAGTAATAGGGGCAGTTTTCAACTCTATTCTGCCAGGAGCTCTCTTCTGCAGAATGCAAATTGTAACCAGAAAATTCGAAACGTGTTGCTGGAATTAGAATCTGCTCTGATGGCCCCGGACGAAGAAGAAGTCACTACATCGAATGCTTCGATGGTTGAGAGCAGTGGACCAACAACATCTGGCCAAAGAAACAGGTCATGGAGTCATGATCACTACGGCTCGCAATTTGTTCAGAGCCAGGGATCATATGTAACTGGAAGCAGGCAAACAAGTGAGTTTGAACATGTTATGAAGCGCCAGAAATCGATAGTGGAAGCATCATCGCCCCCAGGTTTCCCATCGGGAAATTTGAAACAATTGCTGGTTGCTTGTGCAGAGGCCATGGCTGATGGCAACATGAATGATTTTGATCAATTGATATCAAAGGCTAAAGGTGCTGTATCTATAACCGGTGAGCCATTGCAACGGCTCGGTGCTTACATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCAGGGACCGGCATCTATCGCGCCCTTAAGTGCAGAGAGCCGGAAGGCAAAGACTTACTTTCATACATGCAAATGCTGTTTGAAATCTGTCCCTATCTGAAATTTGGTTACATGGCAGCCAATGGAGCCATAGCCGAAGCATGCCGAGATGAGGATCACATACACATAATAGACTTTCAGATTGCTCAAGGAACTCAATGGATGACTCTCCTCCAAGCTCTGGCGGCAAGACCTCGTGGACCGCCCCATGTGAGGATCACAGGGATTGATGACCCTGTTTCCAGGTATGCTCGTGGCGAAGGACTAGAGGTAGTTGGGAAAAGGCTGGCCATGATGTCTGAGAAATTTCGCATCCCGGTGGAGTTTCATGGAGTGCCGGTTTATGCTCCGGATGTGACCAGAGAGATGTTAAATATCAGGTCCGGAGAGGCTTTGGCTGTGAACTTTCCTTTGCAACTTCACCATACCGCCGATGAGAGTGTTGATGTGAATAACCCAAGAGATGGAATCCTTAGACTGGTGAAGTCGCTTTCGCCCAAGGTGGTAACATTGGTGGAGCAGGAATCAAACACAAACACAACACCATTTTTCAACAGATTCATGGAGACCTTGGACTACTACTTGGCGATCTTCGAGTCTATTGATGTCACACTCCCAAGAAACAGCAAGGAGAGGATCAATGTGGAGCAGCATTGTCTGGCCAGGGACATTGTCAACATTGTGGCTTGTGAAGGGAAGGAGAGGGTCGAGCGCCACGAACTCTTCGGCAAGTGGAAGTCGAGGTTGACTATGGCCGGATTCCGGCAGTGTCCTTTGAGCTCCTATGTGAATTCTGTTATAAGAGGCCTTCTCAGGTGCTATTCTGAGCACTATTCCTTGGTGGAGAAGGACGGAGCCATGTTGTTGGCCTGGAAGAACAGAAATTTGATATCAGCTTCAGCATGGCACTGA 1764 0.4796 MDSQQLYSFGVTSAGLPYIPSFPAIPSSQPNRLLGSLKFDTGNSPNSPFSTHFDSDTLSAFSDSQDQQHSPGEILSGVSTSCNSPFETNHYLHTSVSSADSNRGSFQLYSARSSLLQNANCNQKIRNVLLELESALMAPDEEEVTTSNASMVESSGPTTSGQRNRSWSHDHYGSQFVQSQGSYVTGSRQTSEFEHVMKRQKSIVEASSPPGFPSGNLKQLLVACAEAMADGNMNDFDQLISKAKGAVSITGEPLQRLGAYMVEGLVARKEASGTGIYRALKCREPEGKDLLSYMQMLFEICPYLKFGYMAANGAIAEACRDEDHIHIIDFQIAQGTQWMTLLQALAARPRGPPHVRITGIDDPVSRYARGEGLEVVGKRLAMMSEKFRIPVEFHGVPVYAPDVTREMLNIRSGEALAVNFPLQLHHTADESVDVNNPRDGILRLVKSLSPKVVTLVEQESNTNTTPFFNRFMETLDYYLAIFESIDVTLPRNSKERINVEQHCLARDIVNIVACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRGLLRCYSEHYSLVEKDGAMLLAWKNRNLISASAWH* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1086 587 Pfam GRAS domain family 217 586 IPR005202 -
Ahy18g1086 587 MobiDBLite consensus disorder prediction 45 79 - -
Ahy18g1086 587 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 587 - -
Ahy18g1086 587 MobiDBLite consensus disorder prediction 141 169 - -
Ahy18g1086 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 587 IPR005202 -
Ahy18g1086 587 MobiDBLite consensus disorder prediction 140 169 - -
Ahy18g1086 587 ProSiteProfiles GRAS family profile. 208 587 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1086 Ahy-Chr18 16275970 16279015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1086 215 586 GRAS Transcription Factor Family AT1G50600 61.559 1.51e-171 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy18g1086 GRAS 1.90E-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1086 - - adu:107462432 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1086 18 16275970 16279015 Ahy18g1086 18 16275970 16279015 ECH
Ahy18g1086 18 16275970 16279015 Ahy8g1819 8 36449675 36452733 hybridization
Ahy18g1086 18 16275970 16279015 Ahy13g1749 13 27776148 27779405 PCT
Ahy13g1749 13 27776148 27779405 Ahy18g1086 18 16275970 16279015 PCT