Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1085 ATGAAAGAGGAATCAACAGGACTAATCATTGGGATCTCCATAGGTGTAGTTATTGGAGTTGTTCTTGCAATTTCTGCACTTTTCTGCTTTAGATACCATAGGAAGCGTTCACAGATTGGGAACAGCAGTTCCAGGAGGGCAGCCACCATACCGATTCGCGCAAATGGTGCCGATTCGTGTACTATTCTCTCGGACTCAACCTTAGGTCCAGAATCACCTGTGAAGGCCGCGTCGCGAAATGGGGGCATGTCCTTCTGGCTTGATGGATTTAAGAAGAGTAGCATGGTTTCAGCATCTGGTATACCAGAATATTCTTACAAGGATTTGCAGAAAGCAACCTATAATTTTACAACACTCATAGGACAAGGTGCTTTTGGTCCTGTTTATAAAGCTCAGATGTGTACTGGGGAGACTGTTGCGGTTAAAGTTCTTGCAACAAATTCCAAGCAAGGGGAAAAAGAATTTCACACTGAGGTTATGTTGTTGGGAAGGTTGCATCATAGAAACCTGGTCAATTTGGTTGGATATTGTGCAGAAAAGGGGCAACATATGCTTGTATATGTTTACATGAGTAAAGGCAGCTTGGCTTCCCACTTGTACAGCGAAGAGAATGGGACGCTGGGTTGGGATTTGAGGGTGCACATAGCTTTAGATGTAGCAAGAGGCTTGGAATATCTTCATGATGGAGCAGTTCCTCCTGTAATCCATAGAGATATCAAGTCTAACAATATTCTCTTGGACCAGTCGATGCGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGGTGGTAGATAAACAGGCAGCAATTCGCGGAACCTTTGGATACCTTGATCCTGAGTATATATCTTCGGGAACATTCACTAAGAAGAGTGATGTTTATAGTTTCGGTGTGTTGCTCTTTGAACTTATAGCTGGAAGAAATCCACAGCAAGGTCTAATGGAATATGTTGAACTTGCGGCAATGAACACGGATGGAAAAGTTGGTTGGGAGGAGATTGTTGATTCTAGGCTAGAGGGTAAGTGTGACTTTCAAGAGCTCAATGAAGTCGCGGCCCTTGCCTATAAGTGCATCAACCGTGCTCCGAGGAAGCGGCCGTCCATGAGGGACATCGTGCAGGTGCTGACGAGGATTGCGAAGTCTCGGCACCACAGGAATCATCACCACCACAAAAAGTCCTTGTCAGCAACAACAGCAGATGAAGTTTCCATTGATGTTGATAATCAAGACACCAAGGTTACTGCTGTTTCTCAGCACAGGAGAGAAGAGTCTATAGATAGTGCAGCTGACATGTATGATGTGTAG 1308 0.4472 MKEESTGLIIGISIGVVIGVVLAISALFCFRYHRKRSQIGNSSSRRAATIPIRANGADSCTILSDSTLGPESPVKAASRNGGMSFWLDGFKKSSMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMCTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSEENGTLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFGLSREEVVDKQAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTDGKVGWEEIVDSRLEGKCDFQELNEVAALAYKCINRAPRKRPSMRDIVQVLTRIAKSRHHRNHHHHKKSLSATTADEVSIDVDNQDTKVTAVSQHRREESIDSAADMYDV* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1085 435 PANTHER OS01G0253100 PROTEIN 5 408 IPR045271 GO:0004714|GO:0006468
Ahy18g1085 435 SMART serkin_6 114 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1085 435 MobiDBLite consensus disorder prediction 415 435 - -
Ahy18g1085 435 Pfam Protein tyrosine and serine/threonine kinase 116 376 IPR001245 GO:0004672|GO:0006468
Ahy18g1085 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Ahy18g1085 435 MobiDBLite consensus disorder prediction 381 403 - -
Ahy18g1085 435 MobiDBLite consensus disorder prediction 415 429 - -
Ahy18g1085 435 ProSiteProfiles Protein kinase domain profile. 114 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1085 435 Gene3D Phosphorylase Kinase; domain 1 88 189 - -
Ahy18g1085 435 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 408 - -
Ahy18g1085 435 SUPERFAMILY Protein kinase-like (PK-like) 103 390 IPR011009 -
Ahy18g1085 435 CDD STKc_IRAK 120 379 - -
Ahy18g1085 435 Gene3D Transferase(Phosphotransferase) domain 1 190 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1085 Ahy-Chr18 16183923 16188404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1085 24 376 Glycoside Hydrolase AT3G07070 39.247 5.78e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Ahy18g1085 PK_Tyr_Ser-Thr 6.00E-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1085 - - gmx:100799586 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1085 18 16183923 16188404 Ahy18g1085 18 16183923 16188404 ECH
Ahy18g1085 18 16183923 16188404 Ahy8g1818 8 36403341 36407591 hybridization