Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1080 ATGAAAATCCAACAATATTATTATATGGGTGTCATAAAGGCTAGCTTTTGCATTGTTTTGGTTCTTTATCTTGTGGGAGCAATTATTAGTCTTGAAGAAAAGAGGAAGCAAGAAGCACAAGAAGAACTCCTTATCCAACTATTTGATCCTAAATCTGAAATTTTTGATAAAGATACGGCAGAGTTATTATGGACTACTTGCTGGGAGGATTTGATTAAAATTGAAGATCTTGATTCATGCCCCATACAATCACCAAGTAACACGAATGAAATTAGTTTAGAAAGAGGAATAATAGCTCAAAGAAACATTGAAAATGTGATTAACAATTGCCAACCCCAATTGAGGGAAGGTTTCCTTGATTGCTTGAGAAGACACAATCCCCTCATCCATGTCTCAAAGAACAGTTTGCATGCAAGTTATGTGAGATTACTCTCTTCCAGAAGAAACTTGGGTCATGTTTTGCTCCAAGATGTGTCAAGAGCAGAAGATGTTGGAGATGAATCGGTGCAAACTAAAACTAAAACGGAAAACACTGCTCCAAAAGAGAGTGGAAGCGAACAAAATGTGTTTGTTATCGTAGGTATAACTGCAGTGTCATCATTTGGAATTGCAGCATTTGTTTTCATATTTTGTTGTAGATGTAGCAGAGCAAATGTTGATCAAACTGATGAGAAACCTCTTCTCAGCTTGTGTAGGACTGACTACTCCAATGGGTCCTTTAACAGTAGAAATCCTCCGCAGGAGTCAATGAAAAAAGAAGACAGCATTGAGACTCTTATGTCAAGTAAAATTTTATTCGATGACAATAAAAATAAAAACTTAGCGCATGAAATATATTCAATGCGATTAGCAGGACCGTATGAAATAAGTTCGGTAGGATTAGGAGGAGCTGATGCTTCTGTTGCCGCTTCGGCAAGACCATCAATGGACTTGAAACCTCCTCCCGGCAGGGTTGGACCACCGTTACCTTTGAAACCTCCTCCTGGAAGGCCAAATCCTCCCTCCGACCCACCAATTCCTCCTCCTTCCGCTGATGAAAATAATCCTCCTCTTCCGCCTCCTCCTGCTGCTGATGCTCCTCCTCCTCCTCCACCGCCAAAGCCGAGTAATGCTCCACCACCTCCTGCACCGCCACCGATTAGAGGTGGTGGGCCTCCGCCTCCTCCACCACCAGATGGAAAAGGCCCTCCACCTCCCCCTCCACCAGGTGTGAAAGGCCCAGGCCCAGGCCCTCCTCCACCACCAGCACTTAAGGGAGGAGGTGGTCCACGACCTCCTGGACCACCTCCTCTAAAAGGTGCGATTGGTGGGAAGGCTAGGCCTCCAGGACGAGGACCCGAAGGTCCTGGAGGTGTTCCCAAGCCAAAACTTAAGCCTTTCTTCTGGGATAAGGTTCAAGCAAACTCAGATCAGGCTATGGTTTGGAATCAGCTCAAAGCAGGATCCTTCCAGTTCAATGAAGAAATGATGGAGTCGCTTTTTGGATATAATGCTGCTCAAGAAAAATCTAAACCCGGAATGAAGAAAGAATCTCGTGAACAAACTCCTCAATATATTCAGATCATTGAACCAAAGAAAGCACAGAATTTGTCAATTCTGTTGAAAGCATTGAATGTAACACTAGAAGAAGTTCGTGATGCACTCCTTGAAGGAAATGAAATACCCCCAGAATTCCTAAACACTTTGTTGAAGATGGCCCCAAGTCAAGAGGAAGAACTAAAGCTCAGACTCTTCACAGGGGACCTACACATGCTTGGACCCGCTGACCGATTCTTGAAAGCCATTGTCGACATTCCATTTGCCTTCAAACGAATCGAAACACTACATTACATGTGCACTCTCTCTGATGAACTCATTACTACTAGAGATTCTTTTGGAGTTTTGGAGGTTGCATGTAATGAACTAAAAAGCAGCAGGCTATTCCTGAAGCTTCTAGAAGCGGTGTTGAAAACAGGAAACAGGATGAACGATGGAACATTCCGAGGCGGCGCGCAAGCATTCAAACTTGACACGCTGCTGAAGCTGTCTGATGTGAAAGGTGTAGACGGGAAAACCACGCTTCTTCACTTCGTGGTGCAAGAAATAATTAGAACAGAGGGCATAAGAGCAATGAGAATGTCAAAAGAGAGCCTAAGCTTTTCGAGCATAAAAACCGACGACCTTCTAGAAGATGTCAACTTAGAGAACGAAGACCAGTACCGGGACCTCGGTCTTAACGTGGTGTCCCGTCTGAGTAGTGAGCTTGAGAATGTCAAGAAAGCAGCGGCTCTGGATGTGGACGGTTTGATATCTACAACGGCCAGACTCGGCCACGGTCTTATAAAGGCCAGAGAATTTGTAAACACGGAACTTAAGACCCTGGAGGATGACCAGGGCTACTACGAAGTCACCAAGAGCTTCGTCGAGAGTGCGGAAGAGGGCGTCGCCAACTTGCTCCGTGAAGAGAAGAAGATCATGGCATTGATAAAGAGCACAGGTGACTACTTTCATGGCAATTCTGGCAAGGATGAAGGCTTGAGGTTGTTTCCGATAGTGCGTGATTTCTTGCTAATGTTGGATAAGGTTTGCAAAGAAATAAAGACTATACCAAAGAAACCACCACCGGCAGCAGCCGCACCGGCTCAGGCACAAGCACAATCACAAGCACAAGCACAAGCACAGGCAGCACCACCGGCGGCACCGGCATCAAATAATAATAATGAAAAACAGGAGAGTGGTAGTTCGAAAACTTCATCAGAGACACGCGCTGCTCCTCCGCCTCCTCCTATTTTTCGCAACCGACTTCCGGTAGTTGCAGAAAGGACGGGTGACTTTAGTTCGGACGATGACAGCCCATAG 2838 0.4531 MKIQQYYYMGVIKASFCIVLVLYLVGAIISLEEKRKQEAQEELLIQLFDPKSEIFDKDTAELLWTTCWEDLIKIEDLDSCPIQSPSNTNEISLERGIIAQRNIENVINNCQPQLREGFLDCLRRHNPLIHVSKNSLHASYVRLLSSRRNLGHVLLQDVSRAEDVGDESVQTKTKTENTAPKESGSEQNVFVIVGITAVSSFGIAAFVFIFCCRCSRANVDQTDEKPLLSLCRTDYSNGSFNSRNPPQESMKKEDSIETLMSSKILFDDNKNKNLAHEIYSMRLAGPYEISSVGLGGADASVAASARPSMDLKPPPGRVGPPLPLKPPPGRPNPPSDPPIPPPSADENNPPLPPPPAADAPPPPPPPKPSNAPPPPAPPPIRGGGPPPPPPPDGKGPPPPPPPGVKGPGPGPPPPPALKGGGGPRPPGPPPLKGAIGGKARPPGRGPEGPGGVPKPKLKPFFWDKVQANSDQAMVWNQLKAGSFQFNEEMMESLFGYNAAQEKSKPGMKKESREQTPQYIQIIEPKKAQNLSILLKALNVTLEEVRDALLEGNEIPPEFLNTLLKMAPSQEEELKLRLFTGDLHMLGPADRFLKAIVDIPFAFKRIETLHYMCTLSDELITTRDSFGVLEVACNELKSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIIRTEGIRAMRMSKESLSFSSIKTDDLLEDVNLENEDQYRDLGLNVVSRLSSELENVKKAAALDVDGLISTTARLGHGLIKAREFVNTELKTLEDDQGYYEVTKSFVESAEEGVANLLREEKKIMALIKSTGDYFHGNSGKDEGLRLFPIVRDFLLMLDKVCKEIKTIPKKPPPAAAAPAQAQAQSQAQAQAQAAPPAAPASNNNNEKQESGSSKTSSETRAAPPPPPIFRNRLPVVAERTGDFSSDDDSP* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1080 945 PANTHER FORMIN-RELATED 169 353 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ahy18g1080 945 PANTHER FORMIN-LIKE PROTEIN 3 169 353 - -
Ahy18g1080 945 MobiDBLite consensus disorder prediction 305 458 - -
Ahy18g1080 945 PANTHER FORMIN-RELATED 372 885 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ahy18g1080 945 PANTHER FORMIN-RELATED 13 139 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ahy18g1080 945 ProSiteProfiles Formin homology-2 (FH2) domain profile. 447 878 IPR015425 -
Ahy18g1080 945 MobiDBLite consensus disorder prediction 313 432 - -
Ahy18g1080 945 MobiDBLite consensus disorder prediction 874 914 - -
Ahy18g1080 945 Pfam Formin Homology 2 Domain 453 852 IPR015425 -
Ahy18g1080 945 PANTHER FORMIN-LIKE PROTEIN 3 372 885 - -
Ahy18g1080 945 PANTHER FORMIN-LIKE PROTEIN 3 13 139 - -
Ahy18g1080 945 MobiDBLite consensus disorder prediction 864 945 - -
Ahy18g1080 945 SMART it6_source 447 867 IPR015425 -
Ahy18g1080 945 Gene3D Formin, FH2 domain 452 890 IPR042201 -
Ahy18g1080 945 Coils Coil 527 547 - -
Ahy18g1080 945 SUPERFAMILY Formin homology 2 domain (FH2 domain) 516 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1080 Ahy-Chr18 16085822 16090087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1080 444 870 FH2 protein (formin) Gene Family AT5G54650 63.972 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1080 - - ahf:112772643 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1080 18 16085822 16090087 Ahy8g1812 8 36356916 36361103 hybridization
Ahy18g1080 18 16085822 16090087 Ahy13g1738 13 27679571 27686198 PCT
Ahy13g1738 13 27679571 27686198 Ahy18g1080 18 16085822 16090087 PCT