Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1071 ATGCAGGGATATCTTGTATTGTGGTTGGTAAGTACCGCAAAGGTCGGGATTAGTGAGTATAGTGTGATGTTATTGTGGAAATATTCTGTTTTGCTACTCAGGGTATTGGTTGTTGAACTTATTGAACTCCCAAATTCAGTGAAAATTTTAATGGATGAGACTGGATATGAAATGTTGGATGAAGAAGCCGGTGACTATGGAGATGTGTTGCAGTTGAGTAAGGAAGAGATAATGAATAAGGCTTTCCGAAGCGATGAAGCAGCATATGAATTTTACAGGAGGTTCAGCAAATGTTTTGGTTTTGGTATTCGAAAGGGTGACTTGGGAAAAGATGAAAGTGGAAGGGTTATTCGTTGTAGATTTTTTTGTAATAGAGCCGGCCTGCGACAACGTCATCACTATGATAGGCTAGATAGGCAGAGAGGTCATAGACCAGAAACGCACACAAATTGTCAGGCAAAGCTGTCAGTCTACCTTGATGTGGTCAGTGGTATATGGAGGGCTCATGGTGTTTCGACGTCCAAGATTATGGGGTATATGGCTGGACAGGCTGGTGGCTATTCTCTAATGGGCTTCACTAAGAAGGATGCTTACAATTATATTAACAAGGCTAAGCGTGCAAAGATTATTGATGGGGACGCCAACGCGGCTGTTGTATACTTGGAGGGAAAAGCGAGGGCAGATCCGATGTCGATGGCTAGGTATAATCTTACTAAGGATAATATGCTGGCCAATATGTTTTGGGCGGATGGTGGTAGTAGAGTTGATTACCAATACTTTGGGAATGTTCTAGCCTTTGATTCGACCTACAAGAAAAATAAATATCAGAGGCCGCTGGTGATATTTTCTGGTGTGAATAACCATAAGCAGACGACAATATTTGGGTTTGGGTTTGTGTTAGATGAAAGTGTTGGGCCTTATAAGTGGTTGCTGGAAAATTTGTTGGAAGTCATGTGTAACAAGAAGCCGTCAGTTGTCGTCACGGATGGCTGTAATTCAATGAAAGCTGCAATCAAGTCTGTTTTTCCAGAGGCAACGCATCGATTGTGTGCTTGGCATATGGAGAAGAACGTAACTGCTAATGTGAAGGAAGAGGGACTGCGGCAATGTTTCACCCGGTGGCTGTACTCGGAGATGGAAATAGATGAATTTGAGGCTGAGTGGGATGATGCAGTTGAAGAGTATGGGTTGCAAAACAGTTTTTGGGCCAAAGAAACTTTTCAAAAAAGGATGATGTGGGCTAATGCGTATCTACAAGACAAGTTCTGTGCAGGCTTTCGGACAACATCCCGGTGCGAAGGCATTAACGCGTATGTGAAGAATTTCCTTAAGTCTAGGCACAGTCTCCTTGATATGGTTCAAAATTTGGAGTTGGTTGTGCGAGAGTACCGCAATAATGAATTGCTTGCACAATTTAGATCATTCCATGGGATGCCGGTTATGACAACTTGTTTGGATCCTCTTGAAAAGTATGCTGCAGATGCATACACGCGGGAGATATTCGTTGATGCGAAGAAGGAAATAGTGGGTGCCGGTGCAGTTAATTTTGTAGCCAAGATTAGACGTTCAACTACAATGGTGTACACATTGGAGGAATATGGAGACCCAGGTAGAGAGGTGATTGTGTTGTACGATAGGGTTTCAATGAAAATGGAGTGCCGATGCAATTTTTGGAGCCAAAAGGGAATTCCTTGTCGTCACATGTTTTTTGTAATGAAGCATGAGCATTTGACTCGAATTCCTGAAAGGATGGATTTGAAGAGGCGGCGCAAGGATGCAAAGTCGTTGGATAAATATGCCGAGATAGAGGAAGCGCTTAACGGTCTCCACACGCTATGTCAGGAACTGGATAGAGGCCATGAAAATGTCCGTCAGAACAAAGCATATGACACGGTTGAAATGCATGACCCTGCTGTGGTGAAGACCAAGGGTGCCCCTCGTGTGAGGAGGCAGGGCGGATGGAAAAGGCGATGCACCCGTTGCCGTAAAACGGGGCACACAAAACGATACTGCAATGCCGATGGTGCCTTTGTATCAAAAGCTAAAGACAACAAAGATTTTGAGGCAACAAATTTAGGGTCGGAGGGGTCATCGCCAACGGAAGGGGTCCGGTTAGAACAGGGCAAAACGGGTGATCTTAGACCCAACAATTTGGCTACGCAGGTTTGCTCAGAGTCATCAGGTTCGAAGATTAGATTACAAGATGAAATTCCTGCTGCAAGTAGACGTAGTGAGACTATGGAATGCAAGAGGAACGTGATACGTAACACCGATGATTTACTAAAACAGCTGCTGACTCAAATAACTGATATCAGTTCAAGACTGGGTTCGAGGTTCCCTGCATAA 2346 0.4403 MQGYLVLWLVSTAKVGISEYSVMLLWKYSVLLLRVLVVELIELPNSVKILMDETGYEMLDEEAGDYGDVLQLSKEEIMNKAFRSDEAAYEFYRRFSKCFGFGIRKGDLGKDESGRVIRCRFFCNRAGLRQRHHYDRLDRQRGHRPETHTNCQAKLSVYLDVVSGIWRAHGVSTSKIMGYMAGQAGGYSLMGFTKKDAYNYINKAKRAKIIDGDANAAVVYLEGKARADPMSMARYNLTKDNMLANMFWADGGSRVDYQYFGNVLAFDSTYKKNKYQRPLVIFSGVNNHKQTTIFGFGFVLDESVGPYKWLLENLLEVMCNKKPSVVVTDGCNSMKAAIKSVFPEATHRLCAWHMEKNVTANVKEEGLRQCFTRWLYSEMEIDEFEAEWDDAVEEYGLQNSFWAKETFQKRMMWANAYLQDKFCAGFRTTSRCEGINAYVKNFLKSRHSLLDMVQNLELVVREYRNNELLAQFRSFHGMPVMTTCLDPLEKYAADAYTREIFVDAKKEIVGAGAVNFVAKIRRSTTMVYTLEEYGDPGREVIVLYDRVSMKMECRCNFWSQKGIPCRHMFFVMKHEHLTRIPERMDLKRRRKDAKSLDKYAEIEEALNGLHTLCQELDRGHENVRQNKAYDTVEMHDPAVVKTKGAPRVRRQGGWKRRCTRCRKTGHTKRYCNADGAFVSKAKDNKDFEATNLGSEGSSPTEGVRLEQGKTGDLRPNNLATQVCSESSGSKIRLQDEIPAASRRSETMECKRNVIRNTDDLLKQLLTQITDISSRLGSRFPA* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1071 781 PANTHER OS01G0607050 PROTEIN 77 616 - -
Ahy18g1071 781 MobiDBLite consensus disorder prediction 690 704 - -
Ahy18g1071 781 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 616 IPR031052 GO:0006355
Ahy18g1071 781 Pfam FAR1 DNA-binding domain 90 169 IPR004330 -
Ahy18g1071 781 MobiDBLite consensus disorder prediction 688 725 - -
Ahy18g1071 781 ProSiteProfiles Zinc finger SWIM-type profile. 538 576 IPR007527 GO:0008270
Ahy18g1071 781 Pfam MULE transposase domain 263 357 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1071 Ahy-Chr18 15972941 15975845 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g1071 MULE 1.40E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1071 - - aip:110265238 1570.44