Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1059 ATGATGGACCAAATCTATGGTGTTCTCAAACTTAGGATTCAGAGAGGCATTAATCTCGCAATTCGCGATTTGCGTTCTAGTGATCCTTATGTTGTTGTCAGCATGGGTACTCAGAAACTTAAAACTAAGATCATGCATAAAGATCTCAATCCCGAGTGGAATGAAGAATTGACCCTTATGCTATTACTCATTGGCATGGTTGACGATATTAAAACTCCAATACATCTGAAAGTTTTCGACAAAGACATGTTCTCAGCAGATGATGAAATGGGTGAAGCAGTTATAGATATAAAGCCATATGTTAAGTGCTGGAACAAAGGATTGGAAAAACTCCCAGATGGTTGTGTAGTGAAAAGAATTCAGCCAAATGAAAATAACTATCTTGCAGAAGAGAGTCCCTGTATTTGGCACAATGGGACTATAATCCAACGTATGCTCTTAAAATTGAGAAATGTCGAGTGTGGTGAATTACTCTGTGAACTTGAATGGCTTAGTGTACTAGGTTCTATGGGCTTATTAGAGCTACAACAATTACATGCTTAA 543 0.3775 MMDQIYGVLKLRIQRGINLAIRDLRSSDPYVVVSMGTQKLKTKIMHKDLNPEWNEELTLMLLLIGMVDDIKTPIHLKVFDKDMFSADDEMGEAVIDIKPYVKCWNKGLEKLPDGCVVKRIQPNENNYLAEESPCIWHNGTIIQRMLLKLRNVECGELLCELEWLSVLGSMGLLELQQLHA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1059 180 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Ahy18g1059 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 168 IPR044562 -
Ahy18g1059 180 SMART C2_3c 8 109 IPR000008 -
Ahy18g1059 180 Gene3D C2 domain 2 169 IPR035892 -
Ahy18g1059 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 2 168 - -
Ahy18g1059 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 98 IPR035892 -
Ahy18g1059 180 Pfam C2 domain 8 99 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1059 Ahy-Chr18 15735305 15736487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1059 39 172 C2H2 Transcription Factor Family AT1G70790 49.265 1.09e-40 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1059 - - ahf:112769638 358.221