Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1049 ATGGAAGTTGCTAAAAGGAAAGCAGCTTCCACGTACACAACCCTACTCTTGATATTCCTGTTTCTCTTTTTGAGCTTTGGTCCTTCTCAAGGACAAAATGCAGCCGGTGCTAACGCCGGCAAAACCAAGCCGGCCGCATTGGCAGACGAGGAGACCAATTTAGATAATACAGCCGCGGAAGCCAAGATTGGCAAACCAGCCAAGGCTGCAGTTGTGGGGGCGGCTGACAAGCCCGCCGCGACTGAAGACGGGGAGGCCGATATCGACGATAAAGCCGCGGCTGACATCGCGGCAGCCAAGGCAAACAATAATCCCACCACGGCTTTAGTCGCGGTTGAGGATGACAAGCCAGCCGCAGCTGGAAAAGCAGGAGCCGCGGCTGGAAAAGCAGCAGCTGAGGCTGCAGATGATGCAGACGGCGCCGCGGCTGGAAAAGCAGCAGCTGCGGCTACAGATGATGCAGACGGGGTCGCCGTCAAAAAGGCCAAGCCTGTCAAGGGGGCCGTCGTGACCACAGCTGCACCAGCGACCGACGTTGAGGTAATTCCAGCTCCTCCGCCTCCACCAGCAGAACTGCAGGTCTGCAATGGCGTGTTCCTAACATACACGCTGATATCACGCGAGAAGGAATACCCATTCGTGAAGAACAAGTCAAATCAAGCATATGCCTTCACGTCCCAAGCCACGATTACAAACGTCGGTGACGAGGAGGTGAAGGGCTGGAGGATGTACATTGGGTTCCAACACCGAGAAATATTGGTTTCCATGGACGGCGCCGTCCCCATCGACGCCGAGGACTTCCCGGCTGCCGTAGGGAACGGCACCACGATCGCCGGAAACCCAATGGTGGATCTAAAGACTGCGATCTTGACGGCTAATGATTTTACTCAAATGTCGGTGAGAGTTGGAATGAAAGGATCACAGTTCGGTCTTGGTGATGGCGCCACCCCTATGCCTAAGACCATTAAGCTTATCAATAGTGGCTTCAAGTGTCCCGCCTCTTCTCGCAGAGGGTCAACAATGATAGTGTGTTGTAGAAAAGACCCTAAAGCGAAGGCATTGGCACTTAAGAAGACAAAGTACCCATCACGTGGCAAAGGGGATTTAACCATTTCATACGACGTTCTACAAGCTTACCAGACGAGCTACTATGCTGAGGTGACCATCCAAAACAACCACCCGTTGGGGCGGCTGGACCACTGGAACCTCACGTGGGAATGGCAGAGGGGCGAGTTCATCTACAGCATGAAAGGTGCCTTCGCGCGCGTCAAGGACCCTTCGGAATGCTTGTATGGCCCTGCAGGCCAGTACTACAGGGACTTTGATTTCACCCAAGTCGCCAATTGCGAGAAGAGGCCCATTATCTCTGATCTTCCTTCTGAGAGAAAAGACGATGAAAAGGTGGGGAAGCTACCATGGTGCTGCAGGAATGGCACAGTGCTATCACCTGTGATGGATAGGAACCAAGCCAGGTCAATGTTCCAGCTCCAAGTTTTCAAGATTCCACCAGATAACAACAGAACAGCACTCACACCACCCATGAAATGGAAGATCGACGGCGTCATCAACCCCCACTACAAGTGCGGCCCACCGGTCAGAGTGGACCCCGCAGAGTACCCTGACCCATCAGGTCTCCAGGCTATTCACACCGCCGTCGCAAGTTGGCACATCGTTTGCAACATGACAAAGCCACAGCCTCAGAAAACAAGGTGCTGCGTCTCATTCTCTGCATTCTACAACGAATCCGCCATCCCCTGCAACACTTGCGCTTGTGGCGGTTGTGACGGTTACCAGCAATGCAACGCAAAGGCACCACCCATGCTTATTCCACCCGACGCGCTTCTCGTTCCGTTTGTTAACAGAACCGCCAAGATGAAAGCGTGGGCCAAGATGAAGCATTTCAAGATTCCCAAACGGATGCCTTGCGGCGATAACTGTCCCGTTAGCATCAACTGGCACGTCAACTCCGACTACAAAACTGGATGGACAGCAAGGATCACGCTTTTCAACTGGGAGCGCTACGCCTTCGATGATTGGTTCACTGCTCTTCAGTTCCACAACAATTCTTTCAGAGATTTCGATGAAGTTTACTCCTTCAACGGAACCAGAATCCCAGGCCTTAGAACCGTCTTCCTTCAAGGATTTAAGGGTTTGAACTATTTGGTGGGACTCACCAACGGAAGCCGCATCGGTGACCCACACGTGCCGGGGAAGCAGCAATCCGTGCTGTCCTTCAAGAAGAAGCATGCCAAGAAATTCAACATCAGAAGAGATGCATTCCCAACGAAGGTTTACTTCAATGGTGAAGAGTGTGCACTCCCTCCAACTACTCCTTCTAATGGTTCCTCACGCATCAAGTCTTCTCCGATCAGTTTCCTTGCTGTCACCATCATCGCATTCTTGTCGTTCTTCGCCATGACCGAACGTTTATTCTGA 2436 0.525 MEVAKRKAASTYTTLLLIFLFLFLSFGPSQGQNAAGANAGKTKPAALADEETNLDNTAAEAKIGKPAKAAVVGAADKPAATEDGEADIDDKAAADIAAAKANNNPTTALVAVEDDKPAAAGKAGAAAGKAAAEAADDADGAAAGKAAAAATDDADGVAVKKAKPVKGAVVTTAAPATDVEVIPAPPPPPAELQVCNGVFLTYTLISREKEYPFVKNKSNQAYAFTSQATITNVGDEEVKGWRMYIGFQHREILVSMDGAVPIDAEDFPAAVGNGTTIAGNPMVDLKTAILTANDFTQMSVRVGMKGSQFGLGDGATPMPKTIKLINSGFKCPASSRRGSTMIVCCRKDPKAKALALKKTKYPSRGKGDLTISYDVLQAYQTSYYAEVTIQNNHPLGRLDHWNLTWEWQRGEFIYSMKGAFARVKDPSECLYGPAGQYYRDFDFTQVANCEKRPIISDLPSERKDDEKVGKLPWCCRNGTVLSPVMDRNQARSMFQLQVFKIPPDNNRTALTPPMKWKIDGVINPHYKCGPPVRVDPAEYPDPSGLQAIHTAVASWHIVCNMTKPQPQKTRCCVSFSAFYNESAIPCNTCACGGCDGYQQCNAKAPPMLIPPDALLVPFVNRTAKMKAWAKMKHFKIPKRMPCGDNCPVSINWHVNSDYKTGWTARITLFNWERYAFDDWFTALQFHNNSFRDFDEVYSFNGTRIPGLRTVFLQGFKGLNYLVGLTNGSRIGDPHVPGKQQSVLSFKKKHAKKFNIRRDAFPTKVYFNGEECALPPTTPSNGSSRIKSSPISFLAVTIIAFLSFFAMTERLF* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1049 811 PANTHER COBRA-LIKE PROTEIN 10 186 809 - -
Ahy18g1049 811 PANTHER COBRA-LIKE PROTEIN 7 186 809 - -
Ahy18g1049 811 Pfam COBRA-like protein 383 562 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1049 Ahy-Chr18 15298655 15301425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1049 188 800 COBRA Gene Family AT3G20580 59.128 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1049 - - ahf:112772953 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1049 18 15298655 15301425 Ahy8g1788 8 35962545 35965348 hybridization