Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1047 ATGGCTACTACCAATGTTTTAAGGTCTAATGAAGTGGGTCATGTCTTATTGGGATTGTTCTGTCTATTGCTCTTGGTAAACAAGGGTAATGCTTATGAGTTTGTAGTAGGGGGTCAAAAGGGTTGGAGTGTTCCAAGTGACCCCAATTCCAATTCTTACAATCAATGGGCAGAAAAGAACAGATTTCAAATAGGAGACTCCCTAGTGTTCAATTACCAATCTGGTCAAGACTCGGTGCTTCAAGTAAGTAGTGAAGACTATGCAAGCTGCAACACTGATGGATCTTCTGAAAAATTCTCTGACGGCCATACAGTCATCAAGCTGAAGCAATCAGGGCCACACTATTTCATAAGCGGAAACAAAGACAACTGTGCCAAGAATGAGAAACTAGTGGTGATTGTGATGGCTGACAGGACCAACAGAAACACCAACCAAACAGGCACTGCTGTTTCTCCTTCTCCTTCTCCATTGCCCACTCTCTCAACAGAGTCAATTGCTCCTTCACCACCAACAGCAGGGACTGTTGGCCCTACACCACCAACAGGAACTGTGGGTGCTCCTCCACCAACAGGGACTGTCGGTGCGCCACCACCAACACCAGCAGGGACTGTAGGTGCTCCACCACCTACACCAACCGGGACTATGGGGACTCCACCTCCTCTGCAAGGAGTTTCACCTCCACCACCAGGGACTTCGTTGACAAACCCAACTTCTGCTCCTGTCAGCCAACCTCCTCCTAATGCCGCTTCTTCAGTCTTTCTCAGCTTTGTTGGCTCTCTTGGAGCACTCATGGCTTCTATTCTGGTTTTATCATTCTAA 819 0.4762 MATTNVLRSNEVGHVLLGLFCLLLLVNKGNAYEFVVGGQKGWSVPSDPNSNSYNQWAEKNRFQIGDSLVFNYQSGQDSVLQVSSEDYASCNTDGSSEKFSDGHTVIKLKQSGPHYFISGNKDNCAKNEKLVVIVMADRTNRNTNQTGTAVSPSPSPLPTLSTESIAPSPPTAGTVGPTPPTGTVGAPPPTGTVGAPPPTPAGTVGAPPPTPTGTMGTPPPLQGVSPPPPGTSLTNPTSAPVSQPPPNAASSVFLSFVGSLGALMASILVLSF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1047 272 Gene3D - 32 148 IPR008972 -
Ahy18g1047 272 CDD OsENODL1_like 32 135 IPR041846 -
Ahy18g1047 272 PRINTS Proline rich extensin signature 196 213 - -
Ahy18g1047 272 PRINTS Proline rich extensin signature 224 249 - -
Ahy18g1047 272 PRINTS Proline rich extensin signature 149 170 - -
Ahy18g1047 272 PRINTS Proline rich extensin signature 173 189 - -
Ahy18g1047 272 Pfam Plastocyanin-like domain 42 126 IPR003245 GO:0009055
Ahy18g1047 272 ProSiteProfiles Phytocyanin domain profile. 32 136 IPR003245 GO:0009055
Ahy18g1047 272 SUPERFAMILY Cupredoxins 31 135 IPR008972 -
Ahy18g1047 272 MobiDBLite consensus disorder prediction 142 171 - -
Ahy18g1047 272 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 12 206 - -
Ahy18g1047 272 MobiDBLite consensus disorder prediction 142 246 - -
Ahy18g1047 272 PANTHER BLUE COPPER PROTEIN 12 206 IPR039391 GO:0009055
Ahy18g1047 272 MobiDBLite consensus disorder prediction 172 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1047 Ahy-Chr18 15272673 15274431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1047 17 196 Phytocyanin Superfamily AT3G20570 55.801 6.47e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1047 - - adu:107462411 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1047 18 15272673 15274431 Ahy18g1047 18 15272673 15274431 ECH
Ahy18g1047 18 15272673 15274431 Ahy8g1785 8 35938968 35941477 hybridization