Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1042 ATGCACTTTGCCATTTTTTTTGTCATCATGGATTGTGAGAATGATTGTTCAGAGAACATCAATGTAACTGAACTTCCAACAATAACACCGTGGAATCACTCTTCAGCAAATGCTCCTCCTTGTGATCAAGAATCATCACATCCAATATTTTCAAACAGAGGCATGGATAATAGCAAAATTTCCTCCGGCGGCTGCGGCAGATTTAATGGAGACCTTCATTGTTCTTCAATAAATCCTCTTTCCGTTCACGAATCAGATCCAAGTTTCCCAAACAGAGGCATGAACAACATGGATGGATTCCATGGAGCAAGTTATGACCTTCATTCTTTTTCAGCAAATGCTCCTCTGCCGCGACAAGAATCAGATCTAATTTTCCCAACCGGAGGCATGATGAACAGCAACATGTGTGGCGGCGGCGGATTCAACCGAGCAAGTGACCTTCTCTTGGTGGTGTCAATGTACGCAGAGCCAACAAAGTCGGAAATCATAGCTCTTGCTAAGTCCGCGATGGATGAATTGTCGAAAATAGCCCTGGAAGGGCAGCCTTTGTGGGTCCCGCAGAAGGACAAGAAGTTCGAAACGCTTAACGATATCGAGTACTTGAGGCAGTTCGGTGAGGTTCAAGAAATTGAATCGATGAAGGAGATTATGAAGCTTGTTGAGGTTGGACAAGAAGAGTCTTCTTCTTCCCAGTACTTGTTGCCAACGGTTGACTCGTTTCGAAGGGAGCTTGTTCCGTTATCTCTCAGTGGAGTTCCCAAAGAAGCTCTTCAAACTGAAGCTTCACGTGATATGGGGTACCTTGAGATCAGTTCCACCAAACTTCTTCACTTGCTTATGGATGTGAATCAATGGTCCAAAGCATTCGACAATATTGTCACTAGGGCAGCGGTGCTAGGAAACTTATCAAATGGAGCGGAAGAAAGTTATGATGGGAAAGTGCAAGTGATGTTCGCAGAATATCATTTGCCTACACCATTTGTGCCAGCAAGGGAGTGCTATTTTGCAAGGTACTGCAAGCAATTACCTTATGAAATGTGGGGTGTTGTTGATGTATCCCTTGAGAAGCATTTTCCATCTCTAGCAACCAATTTCCGAAGAAGACCATCAGGCTGCTTGATTAGGCCAATGCCAGACGGATTCTCTAAGGTTATATGGGTGGAGCATGTGGAAGCAGACCATAGCCAACTGAGCAACCATTTCCGGCCACTAGTAACAACGGGTTTGGGTTTTGGTGCAACTCGTTGGATTAATTCTATAGTTAGGCACACTGAATCATCTAAAATTATGGAGGCTAAATCAGCTCCAATTTATGTGGATTATGGAGTTATAATACCACAAGCTGGAAGGACAAGTTTCCTTAACCTGGCAGACAGACTTGTGAGAAGCTTTTGTGGTGATATCAATGCTTCAATGACGAATCAATGGATGCCATTAATATCTTCAGAATCTGATTCTTCAGATGTGAGGGTGATGATCAGGAATAACATTGAGGATCCTGGGAAACCTATTGCTACAACTGTGGTGTTTAGCACTTGTCTTTGGCTTAACGTCTCACCATCACGGTTGTTCAATTTCTTGCGTCACGAGGATTCAAGAAACAAGTGGGATTTACTTTCACGTAATCTTACAATTCGGGAATTTGCATATATGAACAAAGGCACAAATCCAGGGAATCGTGTTTCCTTAATGCGAGCAATGAAATCTGAAGACAAGATTGAGATCTTTTACATTCAAGAGAGCTACACAGACACAACAGGATCCTATATTGTTTATGCTCCACTAGACGAATTTGCTTTGTCATCTCTTGCAAATGGAGCAAACCCTAACAATGTAATGGTCCTTCCATCAGGATTTTCTATCCTTCCTTGTGGGTTCCCTAGTGATTATATTGATGAGAAGGGTGAAGGTGGAAGCATTTTAACTATTGCGTTTCATACAATTGAGAGTCACAACATTAAACAATTTTTTTCTCTTGAATCAGTTATTGTCATGAAAAAGATTATTTCAGAGACTGTCACCAATATAAAAGATGCTGTGTTGTATAATAATTACACTAACAATTGGCAGTATAACTGA 2079 0.417 MHFAIFFVIMDCENDCSENINVTELPTITPWNHSSANAPPCDQESSHPIFSNRGMDNSKISSGGCGRFNGDLHCSSINPLSVHESDPSFPNRGMNNMDGFHGASYDLHSFSANAPLPRQESDLIFPTGGMMNSNMCGGGGFNRASDLLLVVSMYAEPTKSEIIALAKSAMDELSKIALEGQPLWVPQKDKKFETLNDIEYLRQFGEVQEIESMKEIMKLVEVGQEESSSSQYLLPTVDSFRRELVPLSLSGVPKEALQTEASRDMGYLEISSTKLLHLLMDVNQWSKAFDNIVTRAAVLGNLSNGAEESYDGKVQVMFAEYHLPTPFVPARECYFARYCKQLPYEMWGVVDVSLEKHFPSLATNFRRRPSGCLIRPMPDGFSKVIWVEHVEADHSQLSNHFRPLVTTGLGFGATRWINSIVRHTESSKIMEAKSAPIYVDYGVIIPQAGRTSFLNLADRLVRSFCGDINASMTNQWMPLISSESDSSDVRVMIRNNIEDPGKPIATTVVFSTCLWLNVSPSRLFNFLRHEDSRNKWDLLSRNLTIREFAYMNKGTNPGNRVSLMRAMKSEDKIEIFYIQESYTDTTGSYIVYAPLDEFALSSLANGANPNNVMVLPSGFSILPCGFPSDYIDEKGEGGSILTIAFHTIESHNIKQFFSLESVIVMKKIISETVTNIKDAVLYNNYTNNWQYN* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1042 692 CDD START_ArGLABRA2_like 159 425 - -
Ahy18g1042 692 SMART START_1 207 426 IPR002913 GO:0008289
Ahy18g1042 692 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 142 682 IPR042160 -
Ahy18g1042 692 SUPERFAMILY Bet v1-like 448 652 - -
Ahy18g1042 692 SUPERFAMILY Bet v1-like 261 425 - -
Ahy18g1042 692 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 142 682 - -
Ahy18g1042 692 Gene3D - 254 404 IPR023393 -
Ahy18g1042 692 Pfam START domain 249 425 IPR002913 GO:0008289
Ahy18g1042 692 ProSiteProfiles START domain profile. 155 429 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1042 Ahy-Chr18 15162890 15167518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1042 116 680 Homeobox Transcription Factor Family AT4G21750 37.902 2.82e-120 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1042 K09338 - jre:108992281 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1042 18 15162890 15167518 Ahy18g1042 18 15162890 15167518 ECH
Ahy18g1042 18 15162890 15167518 Ahy8g1782 8 35884504 35888903 hybridization