Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1035 ATGGACCATGATATACTTGGTCTTATCAAACTTAGGATTAAAAGGGGCATTAATCTCGCAAAACGCGATACTTTTTCTAGTGACCCTTATGTTGTTGTCAAAATGGAAGAACAGAAGTTGAAAACTGCGTTCATACGTAAAAATATTAATCCAGAATGGAATGAAGAATTGACTCTTTATGTTAAGGATGTTGCAACTCCAATAACTGTGCAAGTTTATGACAAAGACACATTCACTGCAGACGATGAAATGGGAGATGCATTTATAGACTTAAGGCCGTATATCGGGTGCTATTATTTGATGGGGTTAGAGAGATTGCCAGATGGATGTATGGTAAAGAAAATTCAACCAAATAAGACTAACTGTCTTGCTGAAGAGAGCACATGCTTTTGGCGCAATGGCTGTATAGTCCAAAATATGATACTAAGATTGAAAAATGTTGAGTGCGGCGAAATAGAGTGTGAGATTGAGTGGCGTGATATTCCTGGTTGTAAAGGTTTATCTGGACTAAGATCTTGA 519 0.3738 MDHDILGLIKLRIKRGINLAKRDTFSSDPYVVVKMEEQKLKTAFIRKNINPEWNEELTLYVKDVATPITVQVYDKDTFTADDEMGDAFIDLRPYIGCYYLMGLERLPDGCMVKKIQPNKTNCLAEESTCFWRNGCIVQNMILRLKNVECGEIECEIEWRDIPGCKGLSGLRS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1035 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 165 IPR044562 -
Ahy18g1035 172 Pfam C2 domain 8 93 IPR000008 -
Ahy18g1035 172 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Ahy18g1035 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 159 IPR035892 -
Ahy18g1035 172 Gene3D C2 domain 6 163 IPR035892 -
Ahy18g1035 172 PRINTS C2 domain signature 47 60 IPR000008 -
Ahy18g1035 172 PRINTS C2 domain signature 68 76 IPR000008 -
Ahy18g1035 172 PRINTS C2 domain signature 23 35 IPR000008 -
Ahy18g1035 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 4 165 - -
Ahy18g1035 172 SMART C2_3c 8 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1035 Ahy-Chr18 14964039 14967175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1035 39 168 C2H2 Transcription Factor Family AT1G70790 58.015 3.33e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1035 - - zju:107429323 233.032