Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1026 ATGACGACACCGGGGCGGTTGGGAAGCCTCGCTACGACACCGGGATGTGCACGGCGGAGGAACGAAAAATGGACGTGCCTATCCACCCTCCTTTCGCGTGCGGGAGATATGCAGCAGCTTGAGCAGATCTGTGACCCGGAACGATGTGGCGGCTCACAAAACCGCAGCTATGGTGACCAGTCTTTGACGGACATAAAATCCGCTACAAGAACCACAACTTCTCCATCACGTTGCGGTGGTTTGGGGAGACGCAGGAAATTCAGTGCTGCTAAGCTGCGACGAGAGAATACCCAAATAAATGACATCACTCGAGTCTTAATTGATAAATTGGATCACGAGTTCTATCACTATATCAATGATTTAATAGGGATACAACCTCATATAGAAGAACTAGAAAGGCTTCTAAACTTGAATTCACACGAGGATAATGACCTTCGAGTTCTTGGAATTTGGGGTATGGGCGGAATAGGAAAGACAATTCATGCTATGGTATTGTACGATAAAATCTCTTATCAGTTTGATGCTTGCTGTTTCATCCAGGATGTAAGCACAATTTATAGAAATCATGGTTGGGATAAGGCTCCTACTGAAATACAAAAGGCCATTCTTTGTCAAACTGTTCAAGAAGAAAATCTGGAAACAAAAAGTCCTATGGGCATAGCTAGGATCCTACACAATAGGCTATGTAACCCAAAAATCCCTAAAAAGGTCCTTATAGTTCTTGACAATGTTGATGAACAAAGGCAATGGGATACTTTGCGCTTAAATCCAAGATCACTTGGGAGAGGAAGCAGAGTTATCATAACAACAAGGAATCAGCATGTTCTTAATGTGAGTGGAGCAGATACAATCTATGAGGTTCCACTATTGAATGATAATGAGGCTCTTGAGTTGTTCCTAAGAAAAGCCTTCAGAAATGGTCCCCCTAAGAAAATTATTAGTGACGTAATTCTTGAGATACTAGATTATGCTCAAAGTCTTCCATTGGCAATTGAGGCACTAGGTAATGACTTGTATAACATGGAAGAGAAATTATGGAAAAATGCATTGGAAGACTGGAGAGAATGTCCAAAAGAAAATGTTATGAGTGTGCTGCAGAAAAGTTATGACCAAGTAAATATAAATGAGAGAAGAATATTTTTGGACATAGCTTGTTTCTTCGCAGGAAAGAGGAAGAACTTTATAGAGCATATTCTAAGTAGCTGTTGTGGCGATGAATCATCACGTCATGACCTTGCAATTCAAAATATCAGGAGAAATTCACTCATAACTATTAGGAACCATGAAATTCATATGCATAATATGTTACAAGAATTAGGAAAGAAAATTGTTCGGGGAGAATATCCAAAAGAGCCAATGTATTGGACTAGATTGTGGCATGTCAAGGATCTCGAAGCAGTCCTAAAGTCAGATATGGAGTGGAACAATAATGAAGCCATAGTTTTAGATGAGGTAGACGTCACCAAATGCAGACATTTGCGGATTCAAAAATTGTTTGAAAAGAGAAATCTTACACTACTCATATTACATTTTCAGAATTTTCCAGAACTCAATTTTGTTCCTATATTTCAAACCGAAATGCGGTATCTTTTGTGGCACGGTTACCCTTTCCCTTCTTTGCAACTACTCATATGGCGTAACCTTGTTGAATTGAATCTACCGAACAGCAGAGTTCAACAACTATGGGATGAGATTCAGTTAATCCCAAATTTGAAAAGGATGGACTTGAGCAACTCAAGAAATCTTAGAACCACCCCAAACTTTGCAAGCTGTCCAGGACTTGTGCGGCTGGATCTTACAGGATGCATAAACCTAACTGAAGTCCATGATTCAATCGGACTTCTCAGAGAGCTTAATTACTTGAGTTTGCGAGAATGTAGCAGTCTATCCCTTCTTGATTTCGGCCCTAATTGCCAGTTAAGTTCCCTAAGAACTCTACTGCTCTCTGGCTGCACCAACCTCCAGAAAACACCAAATTTCAAAGCGCTTTCAAATCTTAGGTACCTTGATCTTGAGCGATGCACAAGTTTGTCCACAATGCATGAGTCTATTGGTACTCTTGTAACGCTTAAGTACTTGAGTCTGAGAGGCTGCAAAAATCTTGTTCATGCACCTTACATTCTCAATGGCAACTCATCCCTCCTAATTCTGGATTTGAGCGGTTGCATGATGATAACCAACCTTCCCCGCTGCAGACGAAAATTTGCGCCTTCCTCCTGCCTGGAATCTTTGATGGTTTTGAGTCCTGTCTTCCTTGAGCCACAAAGAATTCTTGATTTTGTTGGAGAGTTGATGTTTTTCGATGGGGAGTGGATTTGTTCTAAGCTAGCATATTTAAACTTGGCGCACTGTCATGAACTTAGAAGATTTCCCGAGGCTTCATTTCATGTTCTTCATGAGATGAAAGGTACTTTAGAACGGTATCCACAACTTTCAATCATTGGTCAAGATTATATATTTTCAGCTTCTACTGTGTGA 2478 0.4056 MTTPGRLGSLATTPGCARRRNEKWTCLSTLLSRAGDMQQLEQICDPERCGGSQNRSYGDQSLTDIKSATRTTTSPSRCGGLGRRRKFSAAKLRRENTQINDITRVLIDKLDHEFYHYINDLIGIQPHIEELERLLNLNSHEDNDLRVLGIWGMGGIGKTIHAMVLYDKISYQFDACCFIQDVSTIYRNHGWDKAPTEIQKAILCQTVQEENLETKSPMGIARILHNRLCNPKIPKKVLIVLDNVDEQRQWDTLRLNPRSLGRGSRVIITTRNQHVLNVSGADTIYEVPLLNDNEALELFLRKAFRNGPPKKIISDVILEILDYAQSLPLAIEALGNDLYNMEEKLWKNALEDWRECPKENVMSVLQKSYDQVNINERRIFLDIACFFAGKRKNFIEHILSSCCGDESSRHDLAIQNIRRNSLITIRNHEIHMHNMLQELGKKIVRGEYPKEPMYWTRLWHVKDLEAVLKSDMEWNNNEAIVLDEVDVTKCRHLRIQKLFEKRNLTLLILHFQNFPELNFVPIFQTEMRYLLWHGYPFPSLQLLIWRNLVELNLPNSRVQQLWDEIQLIPNLKRMDLSNSRNLRTTPNFASCPGLVRLDLTGCINLTEVHDSIGLLRELNYLSLRECSSLSLLDFGPNCQLSSLRTLLLSGCTNLQKTPNFKALSNLRYLDLERCTSLSTMHESIGTLVTLKYLSLRGCKNLVHAPYILNGNSSLLILDLSGCMMITNLPRCRRKFAPSSCLESLMVLSPVFLEPQRILDFVGELMFFDGEWICSKLAYLNLAHCHELRRFPEASFHVLHEMKGTLERYPQLSIIGQDYIFSASTV* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1026 825 Pfam Leucine Rich Repeat 547 566 IPR011713 -
Ahy18g1026 825 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 83 656 IPR044974 GO:0006952
Ahy18g1026 825 Pfam NB-ARC domain 137 372 IPR002182 GO:0043531
Ahy18g1026 825 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 657 703 IPR044974 GO:0006952
Ahy18g1026 825 Gene3D Ribonuclease Inhibitor 412 812 IPR032675 -
Ahy18g1026 825 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 657 703 - -
Ahy18g1026 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 383 IPR027417 -
Ahy18g1026 825 Gene3D - 112 283 IPR027417 -
Ahy18g1026 825 Gene3D - 289 373 IPR042197 -
Ahy18g1026 825 PRINTS Disease resistance protein signature 661 677 - -
Ahy18g1026 825 PRINTS Disease resistance protein signature 231 245 - -
Ahy18g1026 825 PRINTS Disease resistance protein signature 324 338 - -
Ahy18g1026 825 PRINTS Disease resistance protein signature 147 162 - -
Ahy18g1026 825 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 83 656 - -
Ahy18g1026 825 SUPERFAMILY "Winged helix" DNA-binding domain 361 468 IPR036390 -
Ahy18g1026 825 SUPERFAMILY L domain-like 445 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1026 Ahy-Chr18 14805898 14817662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1026 122 730 WRKY Transcription Factor Family AT5G45050 28.790 1.77e-57 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1026 - - aip:107614139 833.558