Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1024 ATGGAGTCATCAGTCGAGAGCGCATCATCAACTTCCGCCGGTTGGTCATGGACGATTTGCCTTTTCACCTTAGGTGTGTTTCTTGGTACATTCATGCCAAGCATGTTCCTCTCTTGGAAATCATCCCTGGAGAGGAAGATCCTGCGGGGCTTATTTGGTTATCGGTCATCATCTTTCGCGCCAGCGTGTCCTCCTCTTCCCATGGAAGAGATAGCTGTCACTAATGAGGAACCTTCAACATCCAAGAGCATTATTGAAAGGAAATCATTACTGCAGCAGAACGACGACTACAAATATGATGTGTTTCTAAGTTTTATAGGTACTGACTCCAGCAAAAATTTTACTCGTTTTCTTAACCAATCTATGATCGGCAAAGGTATTTCCACCTTTAAGGTTAACAAGAGGCTAGATGAAGAAGCAATAGATCCAATACCACCACAACATATCTTGCAAGCAATTAGAGCTTCACGGATTTCTATAGTTGTCTTCTCAAGAGATTATGCTCGATCAACCTGGTGTTTGGAGGAATTGGCTACCATCATGGATTGCAGTAAAGACCGGTTGAATCAAGTTGTTTTTCCGGTTTACTATGATATGGAGCGGATTCATGTGCAACGTCAGACTGGGGCATACGAAGATGCCTTTCTTTTGCATTCAAAGAAATTCAAACGGCAAGAGGTTGACCGATGGAGGAAAGCTATGGATGACTTGACCAATTGGAGATATTGGATCATAAAAAAAAGTTCAGAAATTAAGGATAGTGAGAGTCTCGTTCAGCAGGTGTTAAACAAATTAGTTTCTAAATTGTCAAGGTGTGATTCTGATGATTTGGTTGGAAATCAACTCCCCCCGAAGGTGACGAATAAAGATAGCCACTTAAGCATGATCACTCTGATTTCCAACGCTAATATGTATGAATCTCCAGTGTCCATTGGCACTGATTGCTCTCTGATTTCCAGTTCCACGCTTCCCAAAATCTCATCTCCCACTGCACCATCACTCTCTAAATACCGGTCTCATTATTCTTCTTCCTATAGTACCTATACACCAAGTTATGCGCCAACGTGGAATATATCATATCCATCGCGGTCAAGCTCTGCTGATGATTCGGTTCGGTTACGACCCTCCATGGGCTCCAAGGTCATTAACAGTAACCAGTCGGGCCAGCAAAATCCACCTCTCCGGGCTAATAATTTCCTTTCCTCTCACGTAAATGAGAGAACAACACCGGCATCAACATCAAGAATGAGCAAATCAGATTCACACTTTTCGTTTGCCACAAGTAGTCCCCGAGCTTCATCAGTTGCAGCTCTTCCAAGTACATTTTTGGTAGCACCTAGGTTTGGCCCATTATTGGATAATAAATTCTCAAGTTCAAATATTGCATCAGCTTCCATTAGTAACCAAAGTGGAAAATCATCATCACAACAACGGCTCTACAAATATGATGTGTTTCTAAGCTTCAGAGGCAAAAGTACTCGCAACAACTTTGCTAATCATCTATGCAATTGTCTCATCAGGCTTGGTATTTCCACCTTCAGTTATGATAAGAGGGGCGAGAAAGAAGGAGATTGCATTATTCTTCCATCACAGGTCTTGCAAGCAATTCAAGATTCACAGATATCTATAGTTATCTTGACAAAAGATTATGCTGACTCAATCTGGTGTTTGGAGGAAATGTCAGCTATAGTTGATAATAATAGCCACCTTCGAGGATTAAACAAAGGTATCATCCCAATTTTCTATGATTTGGAGCATTTTAGTGTTAGAATGGACAAGCGACTGCACAGGGATGCTAGGGTTCATCGATGGAAGAATGCATTGATGTCTTTGGCCAATTTGCAAGGTCAATCTGTAAGAAATAAGCCAAAATTTCAAGAGATTGAAAATATCATTAAGATGGTGATGAATAGATTAGGTCATAAATTCTCAAAGTCTAGTGATGGCCTAGTTGGGATACAACCTCGTATAGAATGTTTAGAAAATCTACTAAAATTGCATTCATCAGATGATGAAGATGATTTTCGAGTTCTTGGAATTTGTGGCATGGATGGAATCGGAAAGACAACTTATGCTTCAGTCTTGTATGACACAATCTTTGATCACTTTGATGTTTGTTGTTTCATTGAGAACGTAAGCCAAATTTACAGAGATGGCGACGCCATAGGTTTACAGCAAAAAATTCTTCACCAAATTTCAAATGAAGCAAATTTAGAGATACATAGTCTTTTCGAACTATCTGGTTTCATAAGGAAAAGACTATCTCCAAATCATAAGGTCCTTATAGTGCTTGACAATGTTGACAAACTGGAGCAGTTATTACAAAAATTGGGTATAAGTCCTAAATTGCTTGGAATAGGAAGTAGAATCATCATAACCACCAGAGATGAACATATTCTAAAAGTTTATGGAGCAGATGAAATTCACAAGGTTTCACTACTGGATTACAATGATGCTTATGAACTTTTCTTAAGACAAGCCTTCAAAGACAAATCAAGGAACAGTGGTTGTATGGAGCTAGTTCCTGAGATACTAGAATATGCTCAAGGTCTTCCATTAGCCATCAAATCTCTAGGATCTTTCTTCAGGACACGAGATGCTACTATTTTTGAATGGGAACATGCCTTTGAGAGCTTGAGAAAAAAATCCAAACAAAGCAATTTTGGACATTTTTCAAATAAGTTTTGA 2688 0.3943 MESSVESASSTSAGWSWTICLFTLGVFLGTFMPSMFLSWKSSLERKILRGLFGYRSSSFAPACPPLPMEEIAVTNEEPSTSKSIIERKSLLQQNDDYKYDVFLSFIGTDSSKNFTRFLNQSMIGKGISTFKVNKRLDEEAIDPIPPQHILQAIRASRISIVVFSRDYARSTWCLEELATIMDCSKDRLNQVVFPVYYDMERIHVQRQTGAYEDAFLLHSKKFKRQEVDRWRKAMDDLTNWRYWIIKKSSEIKDSESLVQQVLNKLVSKLSRCDSDDLVGNQLPPKVTNKDSHLSMITLISNANMYESPVSIGTDCSLISSSTLPKISSPTAPSLSKYRSHYSSSYSTYTPSYAPTWNISYPSRSSSADDSVRLRPSMGSKVINSNQSGQQNPPLRANNFLSSHVNERTTPASTSRMSKSDSHFSFATSSPRASSVAALPSTFLVAPRFGPLLDNKFSSSNIASASISNQSGKSSSQQRLYKYDVFLSFRGKSTRNNFANHLCNCLIRLGISTFSYDKRGEKEGDCIILPSQVLQAIQDSQISIVILTKDYADSIWCLEEMSAIVDNNSHLRGLNKGIIPIFYDLEHFSVRMDKRLHRDARVHRWKNALMSLANLQGQSVRNKPKFQEIENIIKMVMNRLGHKFSKSSDGLVGIQPRIECLENLLKLHSSDDEDDFRVLGICGMDGIGKTTYASVLYDTIFDHFDVCCFIENVSQIYRDGDAIGLQQKILHQISNEANLEIHSLFELSGFIRKRLSPNHKVLIVLDNVDKLEQLLQKLGISPKLLGIGSRIIITTRDEHILKVYGADEIHKVSLLDYNDAYELFLRQAFKDKSRNSGCMELVPEILEYAQGLPLAIKSLGSFFRTRDATIFEWEHAFESLRKKSKQSNFGHFSNKF* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1024 895 Gene3D - 814 893 IPR042197 -
Ahy18g1024 895 SMART till_3 481 614 IPR000157 GO:0007165
Ahy18g1024 895 SMART till_3 98 240 IPR000157 GO:0007165
Ahy18g1024 895 Pfam TIR domain 481 651 IPR000157 GO:0007165
Ahy18g1024 895 Pfam TIR domain 98 272 IPR000157 GO:0007165
Ahy18g1024 895 ProSiteProfiles TIR domain profile. 97 269 IPR000157 GO:0007165
Ahy18g1024 895 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 93 279 IPR044974 GO:0006952
Ahy18g1024 895 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 476 883 IPR044974 GO:0006952
Ahy18g1024 895 Gene3D - 96 274 IPR035897 -
Ahy18g1024 895 MobiDBLite consensus disorder prediction 378 397 - -
Ahy18g1024 895 Gene3D - 453 612 IPR035897 -
Ahy18g1024 895 SUPERFAMILY Toll/Interleukin receptor TIR domain 473 616 IPR035897 -
Ahy18g1024 895 SUPERFAMILY Toll/Interleukin receptor TIR domain 93 240 IPR035897 -
Ahy18g1024 895 PRINTS Disease resistance protein signature 754 768 - -
Ahy18g1024 895 PRINTS Disease resistance protein signature 848 862 - -
Ahy18g1024 895 PRINTS Disease resistance protein signature 677 692 - -
Ahy18g1024 895 ProSiteProfiles TIR domain profile. 480 639 IPR000157 GO:0007165
Ahy18g1024 895 Pfam NB-ARC domain 670 884 IPR002182 GO:0043531
Ahy18g1024 895 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 93 279 - -
Ahy18g1024 895 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 476 883 - -
Ahy18g1024 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 884 IPR027417 -
Ahy18g1024 895 Gene3D - 619 807 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1024 Ahy-Chr18 14743643 14755768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1024 482 863 WRKY Transcription Factor Family AT4G12020 22.938 3.77e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1024 - - ahf:112771515 1712.97