Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy18g1018 | ATGAGATATAGACAAAGACATTGTAGAAGAGAAGCAGTTAGAGTTTTCATCCAACTGCAATCCCTGCCATTCTCATCCCCTTCCTTTGCTGCAAATTTTCGCGACCTGTTTCTGCCGACGCGCCACGCCTCCCCACGCCTCCCACGCTCAATAAGACAAGAGGTTTCTGCGGCCCTAAATCGCTCAACTGGTTCATCAGGAACACGTGACCATGATTCACCAGATGATAAATCCAAATGGGAATGCGTGAGGAAAGGGGTTTGCTGCATTTGCTGCGAAAGCAATATTGATTCTCTCTTGTACAGATGTGGGCACATGTGCACATGTTCTAACTGTGCTAATGATTTGCACCGAAGTGGAAGGAAGTGTCCAATGTGTCAAGCACCAGTTGTTGAAGTAATTCGTGCTTATTCCATACTATAG | 423 | 0.461 | MRYRQRHCRREAVRVFIQLQSLPFSSPSFAANFRDLFLPTRHASPRLPRSIRQEVSAALNRSTGSSGTRDHDSPDDKSKWECVRKGVCCICCESNIDSLLYRCGHMCTCSNCANDLHRSGRKCPMCQAPVVEVIRAYSIL* | 141 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy18g1018 | 140 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 127 | IPR001841 | - | |
Ahy18g1018 | 140 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 47 | 139 | - | - | |
Ahy18g1018 | 140 | MobiDBLite | consensus disorder prediction | 57 | 78 | - | - | |
Ahy18g1018 | 140 | Pfam | Zinc finger, C3HC4 type (RING finger) | 86 | 132 | - | - | |
Ahy18g1018 | 140 | PANTHER | PROTEIN, PUTATIVE-RELATED | 47 | 139 | - | - | |
Ahy18g1018 | 140 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 138 | IPR013083 | - | |
Ahy18g1018 | 140 | SUPERFAMILY | RING/U-box | 87 | 133 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy18g1018 | Ahy-Chr18 | 14533338 | 14534632 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy18g1018 | 88 | 135 | C3H Transcription Factor Family | AT3G06140 | 37.500 | 4.58e-07 | 45.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy18g1018 | - | - | ahf:112769613 | 298.516 |