Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1011 ATGGATGCAATTAGAGATTCGAGGCTTGCTATCGTTGTCTTCTCTGAAACATACCCCACCTCAACGTGGTGTCTCGATGAAATGTCCGCTATAGCTGATCGCCGCCGACAAAAGAAACAAATTGTTTACCCAGTTTTCTATGACGTTACTTCTTCTGATGTTGGAAGACAAGCGGGCCCGTACAAAAAACACTTCAATGCAGAGCAAATGAGTAGATTTCCCGAAAAAAGGGTTAAGCGATGGAGGAAGGATATGAAGTATTTGTCCAAATTGTATGGATTTCCTTTAATAGACCACAGAAACAGACCAGAGACTGAACACCTGGAAAAGATTATTCTTGATGTGGCAGAGAAATTGAAACATAAATTCAAATTAGAAATCAAAGATCTAATTGGGGTAAAACCCCGTCTAGAAGAGCTACAAGGATTACTTAAGTTGAAATCAGAGGATGTTCCTTTTCAAATTCTTGAAATTTGGGGCATGAGCGGGATAGGGAAGACAGTTCTTGGTATGATCCTGTTCGACAGAATCTCTTATCAATTCGATGCTTTCTGTTTTATCCAGGATGTAAACCATATTCATAGAACGCATGGCAAAGGGGCTGTTACTGAGATTCAAAAACAAATTCTTCATCAAATTTTCCAGGAAAAAAATCTAAAATTTTCAAGTCCTCCCGAAATAGCCAAGATCCTACAAAATAGGCTATGTAACCTAAATCTCCCTAAAAAGGCTCTTATAGTTCTTGACGATGTTAGTGATCCAAAGCAATGGGATGATTTGGGTATCGACCATAATTTACTTGGGAGAGGAAGCAGAGTTGTCATAACTACTAGATTTAAGCATGTTCTTAATGTGCCTACATCGTATGAAATTTACGAGGTTCCACTATTGAATGATGAAGAAGAAGCTCTTAAACTTTTTCAAACAAAAGCCTCCAAGATTGGTTGTCCTAACCCCACTGTCCATGATGTATCTCGAAAGGTAGTAGAATATGCTCAAAGTCTTCCTTCAGCAATTGTGGAACTGGGTTCCTACTTCAATCAAAGACCTGAAGTGCTCTGGGAAGGTTACTTGGAGAGATGGAGAAAATATCCAAATGAAGGATATATGAACTCGCTGCAGGAAACAAGTTATACAGATCTGAAGGGAGATGAGAAGATAATATTTCTAGATATAGCTTGTTTCTTTGGGGGGAAAAGGAACAAGTATGTCGAGCACATTCTAGAGAGTAGAATATCATCAGATCCTCATCTTGCAATTCAAGAGATCTGGAGGAATTCACTCATAAAGATTAGGAACGACGAAATTCATATGCATCAAATATTACGAGATTTGGGCAAGAAAATTGTTCGGGGCAATAATACAGAAGAGCCAAAATGCTGGTCTAGATTGTGGGATGCCAAGGATTTCCAGAAAGCCTTGAACACAGACATGCAAGGAAACGCAGTCCAGGCCATAGTTTTGGATGAAGATGTCTCAAGGTTTTTCAAGATTGAGAGAGTGTCGCAAATGAGGCATCTTAGACTGCTGATATTACATCAGGAGAGCCCCTCAGGAAACCACATTTTTTATTTCAATGAGTTATCCTATCTTTCCTGGGATGGTTACGCTTACGCTTCTCTGTCACTATCCATATGGTTTAATCTTGTTGAATTGAATTTACAAAACAGCAGCATCGAACGACTATGGGATGAAGAAGAGGAAATTCCAAACCTAAAAAGAATGGACCTGAGCAACTCAAGAAATCTTACAACCACTCCAAATTTTGTACGCTGCCAAGGACTTGTGCGGCTGGATCTTAGTGGATGCACAAACCTAACTGAAGTCCACGACTCAATTCAACTTCTCAGCAAACTTGATTACTTGAGTTTGCGAAATTGTAGCAGTCTACCCATTCCTGATTTTGGCATTAATTGTCAGTTAGTTTCTCTAAGAACTCTGCTGCTCTCTGGCTGCAACTTCAGGCACAGGAGGCCAGATTTGACAAGGCTTTCAAAACTTAGCTACATTGATTTTTAG 2019 0.3957 MDAIRDSRLAIVVFSETYPTSTWCLDEMSAIADRRRQKKQIVYPVFYDVTSSDVGRQAGPYKKHFNAEQMSRFPEKRVKRWRKDMKYLSKLYGFPLIDHRNRPETEHLEKIILDVAEKLKHKFKLEIKDLIGVKPRLEELQGLLKLKSEDVPFQILEIWGMSGIGKTVLGMILFDRISYQFDAFCFIQDVNHIHRTHGKGAVTEIQKQILHQIFQEKNLKFSSPPEIAKILQNRLCNLNLPKKALIVLDDVSDPKQWDDLGIDHNLLGRGSRVVITTRFKHVLNVPTSYEIYEVPLLNDEEEALKLFQTKASKIGCPNPTVHDVSRKVVEYAQSLPSAIVELGSYFNQRPEVLWEGYLERWRKYPNEGYMNSLQETSYTDLKGDEKIIFLDIACFFGGKRNKYVEHILESRISSDPHLAIQEIWRNSLIKIRNDEIHMHQILRDLGKKIVRGNNTEEPKCWSRLWDAKDFQKALNTDMQGNAVQAIVLDEDVSRFFKIERVSQMRHLRLLILHQESPSGNHIFYFNELSYLSWDGYAYASLSLSIWFNLVELNLQNSSIERLWDEEEEIPNLKRMDLSNSRNLTTTPNFVRCQGLVRLDLSGCTNLTEVHDSIQLLSKLDYLSLRNCSSLPIPDFGINCQLVSLRTLLLSGCNFRHRRPDLTRLSKLSYIDF* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1011 672 Pfam TIR domain 2 123 IPR000157 GO:0007165
Ahy18g1011 672 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 94 IPR035897 -
Ahy18g1011 672 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 653 IPR044974 GO:0006952
Ahy18g1011 672 Gene3D - 1 118 IPR035897 -
Ahy18g1011 672 Gene3D - 119 289 IPR027417 -
Ahy18g1011 672 PRINTS Disease resistance protein signature 155 170 - -
Ahy18g1011 672 PRINTS Disease resistance protein signature 238 252 - -
Ahy18g1011 672 PRINTS Disease resistance protein signature 332 346 - -
Ahy18g1011 672 PRINTS Disease resistance protein signature 567 583 - -
Ahy18g1011 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 392 IPR027417 -
Ahy18g1011 672 SUPERFAMILY L domain-like 486 671 - -
Ahy18g1011 672 SUPERFAMILY "Winged helix" DNA-binding domain 376 474 IPR036390 -
Ahy18g1011 672 Gene3D - 298 386 IPR042197 -
Ahy18g1011 672 Gene3D Ribonuclease Inhibitor 454 672 IPR032675 -
Ahy18g1011 672 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 653 - -
Ahy18g1011 672 ProSiteProfiles TIR domain profile. 1 119 IPR000157 GO:0007165
Ahy18g1011 672 Pfam NB-ARC domain 141 353 IPR002182 GO:0043531
Ahy18g1011 672 Pfam Leucine Rich Repeat 548 565 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1011 Ahy-Chr18 14369841 14374388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1011 131 645 WRKY Transcription Factor Family AT5G45050 30.147 3.05e-55 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1011 - - aip:107614521 1362.82