Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1005 ATGTACCGTAGAATCAACACCCGACCATTATACGTGGCTGACATAGAGGACCAGGAGAACGAGCCCGAGCCCGCATCAGAAGCCGGGCCTGCTTCTCCTTCCTCAGGTGAAATAGACATACCCACCCATGACACAAAATTTGAAGCACCATCACCTAAGAAAAGGAGGGAGATGAAGAAGAGAGTGGTCACAATACCGATCGGTGACGTGGACGGATCTAAGAGCAAAGGAGAATCATATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCACCTTACCCAAGAGGATATTACCGATGCAGCAGCTCAAAAGGGTGCCCGGCGAGGAAGCAAGTTGAACGAAGCCGTGTGGACCCCACAAAGCTCATCGTCACCTACAACTACGAACACAACCACTCTCTTCCGGTAACCAAATCCCACTCCTCCTCCTCTTCCTCCTCTTCTGCCACCGGTAACGCCACCGCTACCGCCGTCACCGAAGTCGTTGTGGCCACCTCTCCCTCCGAGTCCGCCGCTGGCTTCCCGCCGGAGGATCTGACGGTATTCTCGAGCCACGTCGATCTCGACCTCTCCGGCGACTCCGCAGTACTTCTCAGCCACCACAACCACCACGGATTCGGGTGGTTCGACGACGTGGCCTCAGCCGGCGGCGTCCTGGAGAGTCCGATCTGTGGCTGCGTTGATGACATGGCGCTGACGGCGGAGGAGGAGGACGGGGAAGAGTCGCTTTTCGCCGGCCTCGGCGAGCTGCCGGAGTGCTCGGCTGTTTTCCGGCGAAGGAATATTCCAAGCGCCAGCGCGATCCAGTGCGGTGGCATCACAGGATAA 852 0.5786 MYRRINTRPLYVADIEDQENEPEPASEAGPASPSSGEIDIPTHDTKFEAPSPKKRREMKKRVVTIPIGDVDGSKSKGESYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYNYEHNHSLPVTKSHSSSSSSSSATGNATATAVTEVVVATSPSESAAGFPPEDLTVFSSHVDLDLSGDSAVLLSHHNHHGFGWFDDVASAGGVLESPICGCVDDMALTAEEEDGEESLFAGLGELPECSAVFRRRNIPSASAIQCGGITG* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1005 283 PANTHER OS01G0750100 PROTEIN 29 278 - -
Ahy18g1005 283 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 29 278 IPR044810 GO:0003700
Ahy18g1005 283 MobiDBLite consensus disorder prediction 41 55 - -
Ahy18g1005 283 SUPERFAMILY WRKY DNA-binding domain 78 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy18g1005 283 Gene3D WRKY domain 70 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy18g1005 283 SMART WRKY_cls 82 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g1005 283 MobiDBLite consensus disorder prediction 1 87 - -
Ahy18g1005 283 Pfam WRKY DNA -binding domain 84 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g1005 283 ProSiteProfiles WRKY domain profile. 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1005 Ahy-Chr18 14234970 14238440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1005 1 270 WRKY Transcription Factor Family AT3G58710 46.494 2.34e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy18g1005 WRKY 1.50E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1005 - - ahf:112707218 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1005 18 14234970 14238440 Ahy8g1750 8 35583882 35586950 hybridization