Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy18g0993 | ATGTCGGGAGTGGGACCTATCTCGCAGGACTGGGAGCCGGTGGTAATTCGCAAGAAGGCTCCTACCGCCGCTGCCAAGAAGGACGAGAAGGCCGTCAACGCCGCCCGCCGCGCCGGCGCCGATATCGAAACCGTCAAGAAATATAATGCTGGGACAAACAAAGCGGCATCTAGTAGCACGTCATTGAACACCAAGAGGCTTGATGATGATACAGAGAATCTAGCTCATGAACGCGTGCCGACTGAACTCAAGAAGGCTCTCATGCAAGCAAGGATGGACAAGAAACTCACTCAAGCACAGCTTGCTCAGATTATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGAAAAGCGATTCCAAACCAGCAGATAATTGGCAAGTTGGAGAGGGCCCTTGGTGCCAAACTGCGAGGCAAGAAATAA | 429 | 0.5221 | MSGVGPISQDWEPVVIRKKAPTAAAKKDEKAVNAARRAGADIETVKKYNAGTNKAASSSTSLNTKRLDDDTENLAHERVPTELKKALMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK* | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy18g0993 | 142 | Gene3D | - | 71 | 142 | IPR010982 | GO:0003677 | |
Ahy18g0993 | 142 | PANTHER | MULTIPROTEIN BRIDGING FACTOR 1B | 1 | 142 | - | - | |
Ahy18g0993 | 142 | MobiDBLite | consensus disorder prediction | 51 | 76 | - | - | |
Ahy18g0993 | 142 | PANTHER | ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 | 1 | 142 | - | - | |
Ahy18g0993 | 142 | CDD | HTH_XRE | 85 | 135 | IPR001387 | - | |
Ahy18g0993 | 142 | Pfam | Helix-turn-helix | 87 | 137 | IPR001387 | - | |
Ahy18g0993 | 142 | SUPERFAMILY | lambda repressor-like DNA-binding domains | 81 | 138 | IPR010982 | GO:0003677 | |
Ahy18g0993 | 142 | ProSiteProfiles | Cro/C1-type HTH domain profile. | 87 | 141 | IPR001387 | - | |
Ahy18g0993 | 142 | Pfam | Multiprotein bridging factor 1 | 9 | 79 | IPR013729 | - | |
Ahy18g0993 | 142 | SMART | mbf_short4 | 86 | 141 | IPR001387 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy18g0993 | Ahy-Chr18 | 13946684 | 13948973 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | MBF1 | Ahy18g0993 | MBF1 | 9.10E-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy18g0993 | K03627 | - | gmx:100500420 | 267.7 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy18g0993 | 18 | 13946684 | 13948973 | Ahy18g0993 | 18 | 13946684 | 13948973 | ECH | |
Ahy18g0993 | 18 | 13946684 | 13948973 | Ahy8g1739 | 8 | 35417440 | 35419681 | hybridization |