Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0939 ATGACTCAGTGCAACAGTAATGATTACCCTGAAAACAATCATAACACCATTGTGGAGAGGAACAAAGATATCTTAATTAGTAGAACTTGTCCATCATGTGGTCATCATATCAAATGTCAACAAGACCACCAGGGTGCTGGAATTCACGATTTACCTGGGCTACCAGCTGGAGTGAAGTTTGATCCAACAGATCAGGAAATTCTAGAACATTTGGAAGCCAAGGTGAGGTCTGATATTCACAAGCTTCACCCCTTAATTGATGAGTTTATCCCTACTCTTGAAGGCGAGAATGGAATCTGCTGCACCCATCCAGAAAAGTTGCCAGGAGTAGGCAAAGATGGGTTGATCCGTCACTTCTTTCACCGGCCATCCAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAAGTTCACACTGATGCTGATGGCAGTGAAACAAGGTGGCACAAAACAGGTAAAACTAGACCAGTCTACATCAGTGGCAAGTTGAAAGGCTACAAGAAAATCCTTGTTCTCTACACCAACTACAAGAAGCAAAGGAAGCCTGAGAAAACAAACTGGGTCATGCACCAGTACCACCTTGGCAACAATGAAGAGGAGAAAGAAGGTGAGTTAGTTGTGTCTAAGGTTTTCTACCAGACACAACCTAGACAATGTGCAGGTTCACTACTCATCAAAGATTCATCATCATTCCCTGCTAAACTAAAGGATCAAAGTGGTGTTCATCATCATGAAGTGACTAATAATCATAAGAACAATGGGTTTGTGGAATACTACAATGCATCCTTTATAAGCTTTGCTCAAGGGGAACAACAACATAGGTCAAACAATCCCACATTGATTTCCCATTTTCCTGCTCATGATGGGGCTCCGTTCATTCCTTGA 885 0.4203 MTQCNSNDYPENNHNTIVERNKDILISRTCPSCGHHIKCQQDHQGAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVYISGKLKGYKKILVLYTNYKKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCAGSLLIKDSSSFPAKLKDQSGVHHHEVTNNHKNNGFVEYYNASFISFAQGEQQHRSNNPTLISHFPAHDGAPFIP* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0939 294 Gene3D NAC domain 63 217 IPR036093 GO:0003677|GO:0006355
Ahy18g0939 294 SUPERFAMILY NAC domain 49 213 IPR036093 GO:0003677|GO:0006355
Ahy18g0939 294 Pfam No apical meristem (NAM) protein 55 194 IPR003441 GO:0003677|GO:0006355
Ahy18g0939 294 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 293 - -
Ahy18g0939 294 ProSiteProfiles NAC domain profile. 54 213 IPR003441 GO:0003677|GO:0006355
Ahy18g0939 294 MobiDBLite consensus disorder prediction 133 148 - -
Ahy18g0939 294 MobiDBLite consensus disorder prediction 127 148 - -
Ahy18g0939 294 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 293 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0939 Ahy-Chr18 11907943 11910112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0939 28 294 NAC Transcription Factor Family AT4G28500 65.568 2.82e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy18g0939 NAM 4.90E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0939 - - gmx:100791648 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0939 18 11907943 11910112 Ahy18g0939 18 11907943 11910112 ECH
Ahy18g0939 18 11907943 11910112 Ahy8g1687 8 34472714 34475032 hybridization