Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0935 ATGCTTGCGGTGTCACCTTTGAGGACCAACAGAGATGATGAAATCCAAGGACAGGACCTGGAGACCTTATCCATCATTGGAGAAGACGACTTTGCTGAATTATCCGAGGGCAATTTGTTGGAAAGCATCAACTTCGACGATCTCTTCGCCGGCATCAGCCACGCAGATGTCTTGCCGGATCTCGAAATGGATCCTGACATCTTCGCCGACTTCTCACTCAGCGGAGCTCACAATTCTTCATCCCTAGTCTTGAATGGTTGTGGCAAATCGGCTTCTTCGGAATCCGGGTCGAGTAGTCGAGGGGAGGAGATAGTGAGCAAAAGAGATGGATCCGTCGTAGTGAATCCATCCCCTGGTAATAAAGAAGGTGATAATAAAGGAAGAAAATCATCTTCCTCCTCATCATGTCAATCAAAGAATCCTCATCAAACCAAGAAAAAGGTTAAGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTTGTTCAAGCAGTGGAGCAGCTGGGAGTTGATAAAGCAGTCCCTTCAAGGATTCTAGAGATCATGGGAATTGACTGCCTCACCCGCCATAACATCGCTAGCCACCTTCAGAAATATCGATCACATAGGAAGCATATACTAGCTCGGGAGGCTGAAGCAGCAAGTTGGAGTCAACGGAGGCAGATGTATGGTGGAGGGAGAGGGAAGAGAGAGGTGAGCCCTTGGGTTGCACCAACCATTGGTTTTCCTCCCACTCCAATTACATCAATGCCGCCCCAGTTTAGACCCTTACATGTGTGGGGTCATCCCACCATGCACATGTGGCCGCCTAAACCTCATCAGCCACCGCCTCCTGCACCTTGGCCTTCAGACCCTTCTTATTGGCACCACCCTCACCACCAAAGGGCTCATCAAAAGGCAGTACCACCAGCAACACCGTGTTTTCCACAACCTCTGACAACAACGAGATTTGGTTCTCCGCCAACCACCACCGTGGCGGGTATCCCACCACCACAGCGTGCCATCTATAAAGTAGATCCCGGCATGCCCAAGCCCCTAGTTGACTTCCATCCGTCAAAGGAAAGCGTAGATGCTGCGATTGGTGATGTATTATCAAAACCATGGCTGCCACTGCCACTTGGGCTTAAAGCTCCAGCGGTAGAGTGTGTGGTGGGTGAGTTACAGAGACAAGGAATTCCAAAAATTCCACCCTCAACTCCTGTGCTTAATTAA 1212 0.4992 MLAVSPLRTNRDDEIQGQDLETLSIIGEDDFAELSEGNLLESINFDDLFAGISHADVLPDLEMDPDIFADFSLSGAHNSSSLVLNGCGKSASSESGSSSRGEEIVSKRDGSVVVNPSPGNKEGDNKGRKSSSSSSCQSKNPHQTKKKVKKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHILAREAEAASWSQRRQMYGGGRGKREVSPWVAPTIGFPPTPITSMPPQFRPLHVWGHPTMHMWPPKPHQPPPPAPWPSDPSYWHHPHHQRAHQKAVPPATPCFPQPLTTTRFGSPPTTTVAGIPPPQRAIYKVDPGMPKPLVDFHPSKESVDAAIGDVLSKPWLPLPLGLKAPAVECVVGELQRQGIPKIPPSTPVLN* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0935 403 Gene3D - 144 206 - -
Ahy18g0935 403 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 399 IPR044825 GO:0003700|GO:0045893
Ahy18g0935 403 SUPERFAMILY Homeodomain-like 149 205 IPR009057 -
Ahy18g0935 403 MobiDBLite consensus disorder prediction 86 151 - -
Ahy18g0935 403 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 149 202 IPR006447 GO:0003677
Ahy18g0935 403 Pfam Myb-like DNA-binding domain 151 200 IPR001005 -
Ahy18g0935 403 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 399 - -
Ahy18g0935 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 145 204 IPR017930 -
Ahy18g0935 403 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0935 Ahy-Chr18 11821459 11827146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0935 1 289 G2-like Transcription Factor Family AT5G44190 44.268 1.45e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy18g0935 Myb_DNA-binding 5.10E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0935 - - qsu:112013245 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0935 18 11821459 11827146 Ahy18g0935 18 11821459 11827146 ECH
Ahy18g0935 18 11821459 11827146 Ahy8g1683 8 34420859 34426324 hybridization