Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0912 ATGGAATTGAGAATTGACATGGTTGCTATTGAAAGATTGGAGCTTTGGTTGTTTAAGAGGAGGAAGGGACTAGGGATTTTGTTACAGATTGCATTTGGTTGGTGGATTTTTCTACTGTTTCTTCACCCTGTGGCTGCTCTGAGACCCTTGAGGGAGAGAACTCGTTCTTGGGGTGATGAGTGGCTATTTACAAGAAAAGAAGAGAGTGATATTGGTCCATTTTCACAATGGAACATTACAGGAACTTACAGAGGGACTTGGAAGTTTCTGGATACGGCAAATGGCTCTTCTAGATTTCCAGATATCAGAAAAACACGCGGTAGTTCCGTAATTGAATTAATTAGTACGCCCACAAAGATAACTGGAGTACATTATATCCAGGGGGTCATTATATACCACGATGTTTTCGACAGTGAATATGATGTTGGGGGTGCTCAAATCAAAGTAGAAGGTGTATATATTTGGCCTTTTCGACAGCTTCGGTTGGTGGCCAACAGTGGAAAAGAGGGAGACTCAAGTCAGGATGATGACTATATTTTTTCTAATCCATATCATCTGCTTGGGGTTTTCTCTTCTCAGGTGCTTCAAGATTCTTCACGAGATAAGATATGGAGAAGAAAACACTCTCCAATGCATGAAATGGATAAACATTGTAATATTGAAATCGCTGCACAGATTTCACGCTTGCCATCCTCAAAAAGTGACGGCGAGCGTGATCGTTTTCACCTAGAAGGGTTAATGGAGAGTCCCTCGGTGGATGATGATGGGGACTGCTTCTCAGCTTTACTGTTAAATGCAACTTCTGTTAACATTGAGGTCTATTACAACAAAGCAGTGAACTATACCTTGATGGTTACTTTTATCTCTTTTGTGCAAGTTCTTCTATTGATTCGTCAAATGGAGCATAGCAGCACTCAGTCTATAAGAATTTACTTCGGTGCTGCTAAGGTTTCAATATTAATGATTGGCCAGCAGGCGATAATGGATGCATATCTCTGCCTTTTACACCTTACTGCAGGAATACTAGTTGAATCCTTGTTTAATGCTTTTGCAACTGCCGCATTTTTCAAGTTTGTTGTCTTTTCAATATTTGAGATGAGATATCTTCTCGCCATCTGGAAGGCTAGTAGACCTTTGAGTAATGGGGAAGGTTGGGAGACAATGAGGCGTGAACTTTCCATGTTATACAGTCGTTTCTATGGAATCTTGTTGGGAGGCATTCTTTTGATGTATGAGTTCCATCATTATTTAAGACCAATTCTTCTTCTTATGTACTCTTTCTGGATACCTCAGATAATCACCAATGTTATTCGCGATTCACGCAAGCCATTGCATCCTCACTATATCTTAGGGATAACCATTACTCGGTTAGCAATCCCCTTGTATGTTTTTGGTTGTCCTAACAATTTCATGCGCATAGAATCAGATAGGAGCTGGTGTCTTTATTTGGCTGTATTTATTGGGCTTCAAGCCGCAGTTCTTCTTCTTCAGCATTATCTTGGGTCTCGATGGTTCATTCCTCGTCAGATACTACCTGAGAAATATAGCTACTATAGGAGGTTTGATCAAGATGCAAGACATGCTTCGGACTGTGTGATTTGCATGACATCCATTGATCATACTCAACGGTCTAATGACTGCATGGTGACACCTTGTGATCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGCCCAACTTGCCGGCGCTCTCTACCTCCGGCATAG 1746 0.4107 MELRIDMVAIERLELWLFKRRKGLGILLQIAFGWWIFLLFLHPVAALRPLRERTRSWGDEWLFTRKEESDIGPFSQWNITGTYRGTWKFLDTANGSSRFPDIRKTRGSSVIELISTPTKITGVHYIQGVIIYHDVFDSEYDVGGAQIKVEGVYIWPFRQLRLVANSGKEGDSSQDDDYIFSNPYHLLGVFSSQVLQDSSRDKIWRRKHSPMHEMDKHCNIEIAAQISRLPSSKSDGERDRFHLEGLMESPSVDDDGDCFSALLLNATSVNIEVYYNKAVNYTLMVTFISFVQVLLLIRQMEHSSTQSIRIYFGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSMLYSRFYGILLGGILLMYEFHHYLRPILLLMYSFWIPQIITNVIRDSRKPLHPHYILGITITRLAIPLYVFGCPNNFMRIESDRSWCLYLAVFIGLQAAVLLLQHYLGSRWFIPRQILPEKYSYYRRFDQDARHASDCVICMTSIDHTQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0912 581 SMART ring_2 531 574 IPR001841 -
Ahy18g0912 581 ProSiteProfiles Zinc finger RING-type profile. 531 575 IPR001841 -
Ahy18g0912 581 PANTHER TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 17 581 - -
Ahy18g0912 581 SUPERFAMILY RING/U-box 513 579 - -
Ahy18g0912 581 Pfam Ring finger domain 530 575 IPR001841 -
Ahy18g0912 581 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 517 581 IPR013083 -
Ahy18g0912 581 PANTHER RING ZINC FINGER PROTEIN 17 581 - -
Ahy18g0912 581 SMART ringv_2 530 575 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0912 Ahy-Chr18 11367424 11374512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0912 531 578 C3H Transcription Factor Family AT4G12190 39.583 3.43e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0912 K23788 - gmx:100780140 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0912 18 11367424 11374512 Ahy18g0912 18 11367424 11374512 ECH
Ahy18g0912 18 11367424 11374512 Ahy8g1661 8 34123032 34131197 hybridization