Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0898 ATGGATCATCATCATCAGCAGCAGCAGCAACAAGGAAGTGAACCTTCTACAACAACCAAAGTTGAAAGAAAGATCATAGAGAGAAACAGAAGAAATAAAATGAAGGATCTCTACTCCAAACTCAACTCTCTTCTCCCAAGCTATAGCCCTACGGAAGTGTTACCATTGCCTGATCAAATAGATGAAGCTGTGAAATATATCAAAAGCTTAGAGAAGAAGGTGAAGATGGCAAAGGAGAAGAAGGAGAGGTTGCTAAAAGGGAGGAATAACAACAAGAGATCTCGCGGTTTCGATGAGAAAAATATTACAAAATCTCCAACGATAGATGTTCATGAAATGGGTAATTCCTTGCTTCAAGTGGTTTTGACATGCGGGTTTGAGAACAAGTTTCTTTTCAGTGAGATTATTCGCATATTGCATGAGGAGAAGGTTGAGGTTGTTAGTGCCAATTCTTCTTCACATGGAGATTCAATGATTCATGTTTTACATGCAGAGATTCCTTCGGCATTCCAGCAATTTGGAGCGGCAAGAGTGAGTGAGAGATTGAAGAGGTTTGTGAATGGATCAATCAGTGATGTGGAAATAGATCCAGGGTTTTGGGATGATTTTGAAATTGATACTGACATTTGGGAGCTTCCAGATCTTTCATCAGTAGTAAGCAAGGGTCTTCCAAATCCTTTGTAA 684 0.3962 MDHHHQQQQQQGSEPSTTTKVERKIIERNRRNKMKDLYSKLNSLLPSYSPTEVLPLPDQIDEAVKYIKSLEKKVKMAKEKKERLLKGRNNNKRSRGFDEKNITKSPTIDVHEMGNSLLQVVLTCGFENKFLFSEIIRILHEEKVEVVSANSSSHGDSMIHVLHAEIPSAFQQFGAARVSERLKRFVNGSISDVEIDPGFWDDFEIDTDIWELPDLSSVVSKGLPNPL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0898 227 SMART finulus 24 76 IPR011598 GO:0046983
Ahy18g0898 227 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 16 193 - -
Ahy18g0898 227 Pfam Helix-loop-helix DNA-binding domain 20 71 IPR011598 GO:0046983
Ahy18g0898 227 Coils Coil 60 87 - -
Ahy18g0898 227 Gene3D - 8 97 IPR036638 GO:0046983
Ahy18g0898 227 MobiDBLite consensus disorder prediction 1 32 - -
Ahy18g0898 227 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 16 193 IPR015660 GO:0003700|GO:0006357
Ahy18g0898 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 87 IPR036638 GO:0046983
Ahy18g0898 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 70 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0898 Ahy-Chr18 11043799 11045003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0898 21 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.764 1.07e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g0898 HLH 2.80E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0898 - - aip:107610492 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0898 18 11043799 11045003 Ahy8g1657 8 33979183 33980428 hybridization