Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0897 ATGGCTCATCAGCAGAGAGGTCAAGCTTCTTCTTCAACCAAAATGGAAAGGAAGATCATAGAGAGAAACAGAAGAGAACAAATGAAGAACCTTTGTTTCAAGCTCAATTCTCTTCTCCCTAACTTCAACCCCAAGCAAACATTGCCACCACGTGTTGACCAAATAGATGAGGCCATCATCTACATCAAAACCCTAGAATCAAGGGTTGAGATTGCTAAGGAGAAGAAAGAAAGCTTATTAAACAAGGGAATGAAGAAGAGACCTCATGATTTAGCAGGTAGCAGTGCCTTTGATGATGAGACTCAAGGAACAAGCCTAAAACCCCCAACTATTGAGATTCATGAACGTGGTTCCATGTTAGAGATAGTTCTTATGATTTCTGGCTTTGATAACCAATTCATCTTCAGTGAAATTATTCGCATATTGCATGAAGAGAATATTGAGGTCCTTAGTGCAATTTCTTCTCGCGCTGGAGATTCAATGATTCATGTTGTGCACGCAGAGAATCATCTCTATCAATTAGGAGCAACGAAAGAAATAAGTGAGAGATTAAAAAGGTTTGTGGACGCACATTGTTTGCAGGACATTCAAGGGGCACAGGGGCCATAA 609 0.4039 MAHQQRGQASSSTKMERKIIERNRREQMKNLCFKLNSLLPNFNPKQTLPPRVDQIDEAIIYIKTLESRVEIAKEKKESLLNKGMKKRPHDLAGSSAFDDETQGTSLKPPTIEIHERGSMLEIVLMISGFDNQFIFSEIIRILHEENIEVLSAISSRAGDSMIHVVHAENHLYQLGATKEISERLKRFVDAHCLQDIQGAQGP* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0897 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 65 IPR011598 GO:0046983
Ahy18g0897 202 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 194 IPR015660 GO:0003700|GO:0006357
Ahy18g0897 202 MobiDBLite consensus disorder prediction 85 108 - -
Ahy18g0897 202 Pfam Helix-loop-helix DNA-binding domain 14 66 IPR011598 GO:0046983
Ahy18g0897 202 SMART finulus 18 71 IPR011598 GO:0046983
Ahy18g0897 202 Coils Coil 62 82 - -
Ahy18g0897 202 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 8 194 - -
Ahy18g0897 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 82 IPR036638 GO:0046983
Ahy18g0897 202 Gene3D - 4 92 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0897 Ahy-Chr18 10956054 10957895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0897 2 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.458 1.22e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g0897 HLH 7.90E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0897 - - gmx:100805461 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0897 18 10956054 10957895 Ahy18g0897 18 10956054 10957895 ECH
Ahy18g0897 18 10956054 10957895 Ahy8g1656 8 33909034 33910948 hybridization
Ahy18g0897 18 10956054 10957895 Ahy13g1568 13 22642235 22643746 PCT
Ahy13g1568 13 22642235 22643746 Ahy18g0897 18 10956054 10957895 PCT