Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0888 ATGGAGCCGCTGCTGAGAGGCGAAGGGAGTGGTGGCCGGAGGGACCACGCGCGGGGGATATTCCGCCGCTCCGACGCCATCACCTACGGCTCCAACTATGAGAAAGCTGCTGCACTCGTCGATCTGGCTGAAGATGGTGTTGGACTCCCTGAGCAAATTCTTGATTCTTCAAGCTTTCAAAGTTCTTCAAGATATTATTTCATTTTCATTAAATGCAATATCATGTGGTCTCTTGCTTATTTTGCTTTGATAGTCCTAAATTTCTTGGAGAGACCTCTGTGGTGTGAAAATTATACCAAACCATCTTGCAGCGATAGAGAGTATTTCTTTCTGGGACAGTTGCCATATCTAACTAATGCAGAATGTCTTATTTATGAGGGATTAACTGTTGTGGTGCTAATCATACATACTTTCTTCCCAATATCATATGAAGGGTCCCGTATATATTGGAGAAACGCAATTAATCTGTTGAAGGTCTTCTGTCTGTTAGTTCTCATTGCTGATATGCTGGTTTATGCTATTTACTTGTCTCCAGCGGCTTTTGATTTTCTACCTTTCAGAGTTGCTCCTTATATCAGGGTTATTCTTTTCATTCTGAATATTAGGGAGTTACGTGAAACCATCACTATCTTGAGTGGCATGGTTGGCACATACTTGAATGTCTTGGCTCTGGGGCTTCTGTTTCTTCTTTTTGCAAGCTGGGTGGCTTATGTGATGTTTGAGGATACTATACAAGGAAAAACAGTATTCACTTCTTATGGTGCTACATTGTATCAGATATTTGTTTTATTTACTACATCGAATAATCCAGATGTTTGGGTGCCTGCATACAAGGCTTCACGTTGGTATTGCCTGTATTTCATTATATTTGTTCTTTTGGGGGTTTACTTCGTTACAAACTTGGTCCTTGCCGTTGTTTATGATAGTTTCAAGAGTGAGCTTGTGAAACAAGTTTTCGAGATGGATCGTATGAGAAGAGCAATGTTGGAGAAAGCTTTTAATCTCTTAGATACTCATAGTACTGGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGTTGAACAAATACAGGACTTTACCCAAGATCACCAAGGAAGAATTTGAGTTAATATTTGATGAGCTTGATGATAGTCGTGACGTAAAGCTCAATAAGGATGAATTTGCTGATATTTGCCATGCCATTGCTTTAAAATTCCAGAAGGAGGATTCTATCTCTTACTTTGAGTATTTACCATTCTACAATTCACCCACCTCAAAGCATTTGAAAGAATTTGTGAAGAGACCCATCTTTGGATACCTAGTCTCTTTTCTTCTCGTACTCAATCTAGTTGCAGTTATTATTGAGACAACGCTTGATATACAAAATAATTCTGGTCAAAAGGTGTGGCAAGTGGTTGAGTTCATTTTTGGGTGGATATATGTAATAGAAATGGCTCTGAAGGTTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAATCGCTTTGATTTTGTTATCACTTGGATAATTGTCATTGGAGAAACTATAACTTTTGCTTCGCCTGATGATCAGACTTTCTTCTCAAATGGAGAATGGATCCGTTACCTTCTTCTGGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCAAGCAATTCCGAGGCTTTGTTGCAACTTTCTTAACGCTGTTGCCAAGTTTGACGCCATACTTTGGGATCATATTTTGTGTCTTATGTATTTATTGCTCGGTTGGTGTACAGATTTTTGGTGGACTTGTTAATTCTGGAAACCCTAAATTGCTAGCATCAGATCTTGCTGATAATGACTATTTGCTATTTAATTTCAATGATTATCCTAATGGAATGGTGACACTTTTCAATTTGGTAGTCATGGGGAACTGGCAAGTATGGATGCAGAGCTACAAGGAGTTAACGGGTACTTCTTGGACCTACGTATACTTCATAAGTTTCTACTTAGTCACGGTTTTGCTACTTTTGAACTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGTCACCGGACACCTGTGATGAACAGGACAAGGAAGTTGAAGGAGATAAATATCGAAGACGATCAGTTGGCACAAAATCACGAAGCCAGAGAGTTGATGCTCTTCTTCATCATATGTTGAGCTCTGAGTTGTGTCAAAGTCAAACACAGCCTTCCAATTCATAG 2211 0.3944 MEPLLRGEGSGGRRDHARGIFRRSDAITYGSNYEKAAALVDLAEDGVGLPEQILDSSSFQSSSRYYFIFIKCNIMWSLAYFALIVLNFLERPLWCENYTKPSCSDREYFFLGQLPYLTNAECLIYEGLTVVVLIIHTFFPISYEGSRIYWRNAINLLKVFCLLVLIADMLVYAIYLSPAAFDFLPFRVAPYIRVILFILNIRELRETITILSGMVGTYLNVLALGLLFLLFASWVAYVMFEDTIQGKTVFTSYGATLYQIFVLFTTSNNPDVWVPAYKASRWYCLYFIIFVLLGVYFVTNLVLAVVYDSFKSELVKQVFEMDRMRRAMLEKAFNLLDTHSTGYLNKDQCIRLFEELNKYRTLPKITKEEFELIFDELDDSRDVKLNKDEFADICHAIALKFQKEDSISYFEYLPFYNSPTSKHLKEFVKRPIFGYLVSFLLVLNLVAVIIETTLDIQNNSGQKVWQVVEFIFGWIYVIEMALKVYAYGFENYWRDGQNRFDFVITWIIVIGETITFASPDDQTFFSNGEWIRYLLLARMLRLIRLLMHVKQFRGFVATFLTLLPSLTPYFGIIFCVLCIYCSVGVQIFGGLVNSGNPKLLASDLADNDYLLFNFNDYPNGMVTLFNLVVMGNWQVWMQSYKELTGTSWTYVYFISFYLVTVLLLLNLVVAFVLEAFFAEMELESPDTCDEQDKEVEGDKYRRRSVGTKSRSQRVDALLHHMLSSELCQSQTQPSNS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0888 736 Pfam Ion transport protein 431 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy18g0888 736 Pfam Ion transport protein 76 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy18g0888 736 Gene3D - 311 394 - -
Ahy18g0888 736 SUPERFAMILY EF-hand 314 397 IPR011992 -
Ahy18g0888 736 Pfam EF-hand domain pair 329 393 IPR002048 GO:0005509
Ahy18g0888 736 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 731 IPR044581 GO:0005245
Ahy18g0888 736 SMART efh_1 328 356 IPR002048 GO:0005509
Ahy18g0888 736 SMART efh_1 369 397 IPR002048 GO:0005509
Ahy18g0888 736 MobiDBLite consensus disorder prediction 687 712 - -
Ahy18g0888 736 CDD EFh 328 393 IPR002048 GO:0005509
Ahy18g0888 736 MobiDBLite consensus disorder prediction 692 712 - -
Ahy18g0888 736 Gene3D - 556 716 - -
Ahy18g0888 736 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Ahy18g0888 736 SUPERFAMILY Voltage-gated potassium channels 430 676 - -
Ahy18g0888 736 ProSiteProfiles EF-hand calcium-binding domain profile. 324 359 IPR002048 GO:0005509
Ahy18g0888 736 Gene3D - 203 310 - -
Ahy18g0888 736 Gene3D - 423 555 IPR027359 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0888 Ahy-Chr18 10681222 10692798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0888 2 736 Ion Channels AT4G03560 67.164 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0888 K16900 - gmx:100806160 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0888 18 10681222 10692798 Ahy18g0888 18 10681222 10692798 ECH