Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0869 ATGGAGGTGTCTTTGAGCGAGGCGGATGGTGATTGTGGAGGGAGTGATGGTGATGCTAACGAAGTAGAAAATTCTGATTTGGAAGACCTCGGTGGACTAAGTGTGGATGACATCCTCAAGAAGGTATGGCACATCATTGAAAATGCATATGAGTTCTATCGGGGTTTCGGAAAATTGCATGGATTCGGGGTGCGAAAGGGTGACTCCGGAAAAGACTGTGACGAGAATGTTGTAAGGTACAGGTTTTTTTGTAACAAGGAAGCGTTGAGGGAGCGTAAACACTACGACAGGGTTGACCGAACAAGGGTACACAAACCGGAAACAAGAACCAACTGCAAGGCAATGTTATCGGTTTATCTTGACAAAAATGATAAGCATTGGAAGGTTAGGAAGTTAGTAACTGAACACAATCATGACCTAACACCGGCTGGAATGGTGTACCTGATTGCCAATCATCGTCGGTTAACGGAAGTTGCAAAGACTCAGATAGCCGGTATGCAAGCTCATGGTATTGCGACCTCTAAGATTGTAGGGTACATGGCTGGTATGATCGGGGGATATTCGATGTTGGGGTTCCTGAAGAAGGATGTCTACAACTATGCTGACAAAATGCGGCGCATTAAAGTAGCTGATGGCGATGCGAATTCTGCATTAGTTTATCTAGAGGGAAAAGCCGAATCAGACCCCATGGCAATCGCAAAATATAATGTGACTTCTGACAACAGGCTCGCGAATCTGATTTGGGCCGATGGATCTAGCAGAGTCGATTACCAATTCTTTGGCGATGTTCTGGCGTTCGATTCAACCTACAGGAAAAATAAATACAAGAGGCCGATTGTTATTTTCTCAGGATCAAACAATCATAAGCAGACCACCATATTCGGGTTTGGGTTGTTGCTTGATGAAAGTCTGGCGTCCTATCGGTGGATGCTGGAGAATTTGATGGAGATCATGTGCCGTAAGAAGCCATCTGTAGTGGTGACCGATGGGGACAAAGCTATGATAAAGGCTGTCTCTGAAGTCCTCCCCGAGTCGACGCATCGCTTGTGTGCATGGCATGTAGAGAAGAACGTCACATCGAATGTCAAGGATGATGAATTACGTGGGCTATTCAGAAGATGGTTGTACGCGGACATGGCAACAGATGTATTCGAGTCGGAATGGGAGCAGGCCATGGAAGAGTATGGACTCGGCCATAATCAGTGGTGGTGCCAGATGTATGAGAAAAAGGAGATGTGGGCAAGTAGCTATCTTCATGACAAGTTCTGCGCGGGGTACCGGACCACATCCTGCTGCGAAGGAATTAACGCATATGTAAACAAGTTTTCCAAGTCCACCCACACAATTTTTGAGCTGGTGCAATGCTTAGAGATGGTTGCCCGTGAATATCGGAATAAGGAAATGCTGCTCCAGTTTCAATCCATAAACTCGGTTCCGGTCATGACAACATGCCTGAGAAGTCTTGAACGACATGCCGCTTCGGTGTACACCAGAGAAGTTTTTGGTGATGTAAAGAAGGAGATCGAAGGGGTTGGTGCCTTGATCCTGATTACCAGAAGGAGGATCATGAATTCCATGATATACACCCTAGAGGAGTACGAAGAACCTAATGTCCACATAATGTCATCATTTGGACGGTCAACCGGGAAGTTAACTTGCCAGTGTAATTTCTGGAAGAAGCATGGTTATCCATGCAGGCACATGTTTTTCGTCATGAAGGCAGAGCACTTAAAGGAGATTCCCGACAATATAGTTCTGCGTAGGTGGAGAACTGATGCAAAGTCCGCTGAGCAGTACACAGAAAATTGGGGGGACTATAGCGAGCGTGGTGTCATCCTTCGTCACGGTGCTCTCCATTCCGCCTCGCAATGGCTGTTTTTCCTAGGGGCACAAAGGTTGTCCATGTTCCAGAAGACTATGCGTGGAATTGAAAGTTTATGTAAAGAGCTGCAGATGGACTGTAGGGCATTTGGTTCTAGCATGAACCGGACCGAAGAATACGTTCGTGAAGCCAATCCAGTTGTAAGAGATCCAGTTGTTGCAAAGACAAAGGGTGCCCCGAAAATACCAAAGAAGAAGGCCCTTGGTAAAAGGAGGCGTTGCACCGGCTGCAAGGGCTTGGGACACACAAAGAGAAACTGCCCAGACAAGGGTGCCGGTAGACAAAATCCTGATCAGGCCGAGGAATGTGGGGGAATTAATGCCACCTGCGTAATCTCCAACGATGACTGGGAGTCTATCGTCGGTGATAATCTATGTGCTGAACCCGGGGGCAAATTCAATGCGGACTAG 2292 0.4695 MEVSLSEADGDCGGSDGDANEVENSDLEDLGGLSVDDILKKVWHIIENAYEFYRGFGKLHGFGVRKGDSGKDCDENVVRYRFFCNKEALRERKHYDRVDRTRVHKPETRTNCKAMLSVYLDKNDKHWKVRKLVTEHNHDLTPAGMVYLIANHRRLTEVAKTQIAGMQAHGIATSKIVGYMAGMIGGYSMLGFLKKDVYNYADKMRRIKVADGDANSALVYLEGKAESDPMAIAKYNVTSDNRLANLIWADGSSRVDYQFFGDVLAFDSTYRKNKYKRPIVIFSGSNNHKQTTIFGFGLLLDESLASYRWMLENLMEIMCRKKPSVVVTDGDKAMIKAVSEVLPESTHRLCAWHVEKNVTSNVKDDELRGLFRRWLYADMATDVFESEWEQAMEEYGLGHNQWWCQMYEKKEMWASSYLHDKFCAGYRTTSCCEGINAYVNKFSKSTHTIFELVQCLEMVAREYRNKEMLLQFQSINSVPVMTTCLRSLERHAASVYTREVFGDVKKEIEGVGALILITRRRIMNSMIYTLEEYEEPNVHIMSSFGRSTGKLTCQCNFWKKHGYPCRHMFFVMKAEHLKEIPDNIVLRRWRTDAKSAEQYTENWGDYSERGVILRHGALHSASQWLFFLGAQRLSMFQKTMRGIESLCKELQMDCRAFGSSMNRTEEYVREANPVVRDPVVAKTKGAPKIPKKKALGKRRRCTGCKGLGHTKRNCPDKGAGRQNPDQAEECGGINATCVISNDDWESIVGDNLCAEPGGKFNAD* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0869 763 MobiDBLite consensus disorder prediction 1 24 - -
Ahy18g0869 763 Pfam MULE transposase domain 263 357 IPR018289 -
Ahy18g0869 763 SUPERFAMILY Retrovirus zinc finger-like domains 692 722 IPR036875 GO:0003676|GO:0008270
Ahy18g0869 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 709 IPR031052 GO:0006355
Ahy18g0869 763 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Ahy18g0869 763 SMART 26again6 551 578 IPR006564 GO:0008270
Ahy18g0869 763 Pfam SWIM zinc finger 550 568 IPR007527 GO:0008270
Ahy18g0869 763 PANTHER OS02G0262500 PROTEIN 37 709 - -
Ahy18g0869 763 ProSiteProfiles Zinc finger SWIM-type profile. 538 576 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0869 Ahy-Chr18 10428509 10430884 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g0869 MULE 1.80E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0869 - - aip:107620053 911.753