Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0850 ATGCCTCCTCCATTTGATATGATTTCTAAGATGCATCCTCCTAGAGAGGCTTGGAGGCTGAAAGTTAGGGTTCTAAGACTTTGGGTTGTACCCTCTTTTGGTAACCATAAGGTTCCTAACTCAATGGAGATGATTCTCCTTGATGAGCATTGTAGAAAAATGCAAGCTACAGTCAAGAAACCACTGCTTAATAGGTTTAGAGATCATATAGTTGAAGGACAAGTTTATAGAATGGCATATTTTACTATTGTGTCAAATCATGGTAGTTATAGAGCAACTTCTCATGAATTCAAATTGGTTTTTCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTCATCCCTAAGACTTGTTTCAACATGTTTTCTTTTTCTGAGTTGTTGAACATGACCCAAGATTATGATTTCTTAGTTGATGTCATTGGTCTTTTAACTTCAGTCGGAGAAGAGAAAGAATATGCAAAAGAGGGGAAAATTGTAAAAATGATTGCATTAGAATTAACTTCAAAAGATCTTACAGTGCGATGTGCATTGTTTGGGGATTATGTTAATCAAGTGAATCATTTCCTTGCCTCTGGCTATGTGGAGCAGCCTGTTGTGGTGATTCAGCTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCCTGATATTCCTGAAGTTGTTGAGTTCAGGCAGAGTATGATTGAGCAAGGTGTCAATGGTACCCATCCGCTGTTTATTGCAAATGAGGGTAAAGTTCTCTCATTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACTATTGAAGAGCTTCAAGATAACAATCAGGAGGGTTCTTTTATCATTTTTGGTGCAATTCAAGGTATTGTTGAGGATGGAGGTTGGTGGTATTCTGCTTGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCATATTACTGTGA 972 0.3776 MPPPFDMISKMHPPREAWRLKVRVLRLWVVPSFGNHKVPNSMEMILLDEHCRKMQATVKKPLLNRFRDHIVEGQVYRMAYFTIVSNHGSYRATSHEFKLVFLHRTTVVAVDEDVIPKTCFNMFSFSELLNMTQDYDFLVDVIGLLTSVGEEKEYAKEGKIVKMIALELTSKDLTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQMLFNPDIPEVVEFRQSMIEQGVNGTHPLFIANEGKVLSLEDDFMRLTRKCTIEELQDNNQEGSFIIFGAIQGIVEDGGWWYSACVWKGYLSSKWCILL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0850 323 SUPERFAMILY Nucleic acid-binding proteins 3 112 IPR012340 -
Ahy18g0850 323 Gene3D - 4 112 IPR012340 -
Ahy18g0850 323 CDD RPA1_DBD_B_like 140 243 - -
Ahy18g0850 323 CDD RPA1_DBD_A_like 19 107 - -
Ahy18g0850 323 Gene3D - 114 251 IPR012340 -
Ahy18g0850 323 PANTHER REPLICATION FACTOR A 1, RFA1 22 302 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy18g0850 323 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 22 302 - -
Ahy18g0850 323 Pfam Domain of unknown function DUF223 43 132 IPR003871 -
Ahy18g0850 323 SUPERFAMILY Nucleic acid-binding proteins 120 242 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0850 Ahy-Chr18 10126296 10127883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0850 8 309 Core DNA Replication Machinery Family AT2G06510 24.920 7.37e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0850 - - ahf:112717561 571.237