Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0833 ATGGAAGACCACCGTCATAGAAGACACCCGCTTCTTCCTCTTCCCTCTTCCGCACCAGGTGCCTCCATGAAGCTACTCGATTTCTCGATTTCTCGATTTCATCCAAATTCTTGTGATTATGTTTTGCCAGAAACTTTGTCGTTGAAGGCCATGCCTCCTTCTGTGCCGGCGACAGAAGGGGATGATTTAGTGACCCCTCAGTCCATAGGTGAGGATGCGGTGGATGGAGAAAAATCAAGTGCTGCGGCGGCTTTGGCGGCGGCTGCTGCTGCTGCGGGCCGAATGAAGAAGTCGTCAGTGAAATCGAAATCAGGACCTAAGACAGCATGGCGGAAGCTCCTTTCTCAGTGTTCTCAGAAAGCAACTAAGCAACCAGGGACAATAATGGACACAATCCAAGAGATTCAAGGGTGCCATGACACACTGATTGATATAGAGAGCAGCCTCAATGAGCTTCATCAAGTGTTCTTGGACATGACTGTTTTGGTCCAATCACAAGGTAAGCAACTCAATGACATACAGAGCCACGAGTCAAGAGCCAATTCGTACGTCTGCCGTGGGTTCGGCAGTTTCAGTTTGCAAGGAAGCACCAGAAGAATACTGGAAGTCCATCTTCATTGCCATCATAATATTGATTTATTATATTGA 648 0.4769 MEDHRHRRHPLLPLPSSAPGASMKLLDFSISRFHPNSCDYVLPETLSLKAMPPSVPATEGDDLVTPQSIGEDAVDGEKSSAAAALAAAAAAAGRMKKSSVKSKSGPKTAWRKLLSQCSQKATKQPGTIMDTIQEIQGCHDTLIDIESSLNELHQVFLDMTVLVQSQGKQLNDIQSHESRANSYVCRGFGSFSLQGSTRRILEVHLHCHHNIDLLY* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0833 215 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 132 194 IPR000727 -
Ahy18g0833 215 Pfam Syntaxin 122 167 IPR006011 GO:0016020
Ahy18g0833 215 SUPERFAMILY t-snare proteins 115 187 IPR010989 GO:0016020|GO:0016192
Ahy18g0833 215 CDD SNARE_syntaxin1-like 131 187 - -
Ahy18g0833 215 Gene3D - 67 184 - -
Ahy18g0833 215 PANTHER SYNTAXIN 126 188 IPR045242 -
Ahy18g0833 215 PANTHER T-SNARE-RELATED 126 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0833 Ahy-Chr18 9833438 9835380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0833 119 187 SNARE and Associated Proteins AT1G61290 60.563 1.79e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0833 K08486 - ahf:112772691 394.045