Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0818 ATGTCATATCTAACAAAAAACAAGTGCATGATCATGTCTTCGAAGCATGAGCAAGTGAAGATCATAGAAGAATGTAAAGTTGCACCACCAGAAGGGTCTCTTGCCTCCACCACCACCATTGTTCCCCTCACTTACTTGGATATCCCATGGTTCCTATGCCATCCGGTTAAGCGCATCTTCTTCTATGACTTCCCTAACTCCACCAACCACTTCCTTCAATCATCACTCCCTCCTCTCAAACACTCCCTCTCCCTTTCCCTCCAACACTTCTTTCCATTCGCCTCCAACCTCATCGTACCTCCCTCCCCAAGTGTCCCCTTCATCCGTTTTCTTGACGGTCTTGACTCACTCTCTCTCACCATTGCAGAGTCTAAAGCAGACTTTTCCTTACTTGTATCTGATTCGCCACAAGATGTTCGCTTTCTACACCCTTTGATCGCTTCTTTGCCTCCTAAGGTTACCATGGAGGATGGCACGCTTGTTATGCCTCTCATGGCCATTCAAGTCACTGTTCTTCCAAACACTGGCTTCGCCATTTCTCTAACATTCAGCCATCTCGCCGCCGATGGCTACTCGCTTCATCATTTCATCAAGTTTTGGGCCAATCTTTGCAAGCAAATAATAACAAGAGGTAGTGGAACAAATGATGAAGATATTAAAGAATCTAGTTTTTTGTCTCTTCCTTTTCATGATAGAGACATAGTTAAGGACCCAAAAGGGCTTAAACATGTTTACATGGAAGAGGTAAGAGATTTGCTGAGGAAGAAGAACAACTTGATGAATTCTCAAGTCCCTGTCAATAGTAACACCATGGTACGTGCAACTCTTGTCCTAAACCATAGTCAAGTTGAGAAACTCAAGAAATTTGTGTCTCTTAAATACCGTGACACCTATGGTTCTAATACGTTATTACACATGTCAACGTTTGTGGTCACGTGTTCATTGATTTGGGTTTGTATGATGCAATCAGAAGAACAAACCGAAGGCAATCATCATCATAATAATAAGAATTTTGATGATGAAGTTTGCTATTTCATAATTCTAGCTGATTACCGTGGCCGTTCTGAGTTCTCAATACCTTCAAATTACTTTGGGAATTGCTTGTTGTCTGGGTATGTGAGACTCAAGAGGCGTGAGCTAGTTGGAGAAAATAATGGTAATTATTATCATGGGATTTTTGAGGCAGCAAGTGGAATTGACAGGGAGATTAGAAATCTGAGAAATGATGCATTAACAAGGGTTGAAAGTTTTGTCCCCTATGCTAGAGAATTAAATAAATGTCGTAGTATAACTGTGGTGGCAGGGTCCCCAAAATTAGGAGTTTATCAAACTGATTTTGGGTGGGGAAAGCCTAAGAAATCTGTAGCAGTTCATATTGAATCAGCAGGAGCATTTTCTCTTTCAGATTGTAGGAACAATGAAGGAGCGGTTGAGATTGGAATTGCACTTGAGAGGATCCGAATGAAGAAATTCATCAAAATTTTCGAACAACACCTCCAAAACATCGATCATGATTTCCCTACGTAG 1527 0.4132 MSYLTKNKCMIMSSKHEQVKIIEECKVAPPEGSLASTTTIVPLTYLDIPWFLCHPVKRIFFYDFPNSTNHFLQSSLPPLKHSLSLSLQHFFPFASNLIVPPSPSVPFIRFLDGLDSLSLTIAESKADFSLLVSDSPQDVRFLHPLIASLPPKVTMEDGTLVMPLMAIQVTVLPNTGFAISLTFSHLAADGYSLHHFIKFWANLCKQIITRGSGTNDEDIKESSFLSLPFHDRDIVKDPKGLKHVYMEEVRDLLRKKNNLMNSQVPVNSNTMVRATLVLNHSQVEKLKKFVSLKYRDTYGSNTLLHMSTFVVTCSLIWVCMMQSEEQTEGNHHHNNKNFDDEVCYFIILADYRGRSEFSIPSNYFGNCLLSGYVRLKRRELVGENNGNYYHGIFEAASGIDREIRNLRNDALTRVESFVPYARELNKCRSITVVAGSPKLGVYQTDFGWGKPKKSVAVHIESAGAFSLSDCRNNEGAVEIGIALERIRMKKFIKIFEQHLQNIDHDFPT* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0818 508 Gene3D - 18 261 IPR023213 -
Ahy18g0818 508 Pfam Transferase family 35 496 - -
Ahy18g0818 508 PANTHER - 19 502 - -
Ahy18g0818 508 Gene3D - 268 502 IPR023213 -
Ahy18g0818 508 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 19 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0818 Ahy-Chr18 9531161 9532945 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0818 59 496 Monolignol Biosynthesis Gene Families AT5G48930 22.075 1.35e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0818 - - adu:107462106 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0818 18 9531161 9532945 Ahy18g0818 18 9531161 9532945 ECH
Ahy18g0818 18 9531161 9532945 Ahy8g1586 8 32849600 32851307 hybridization