Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0806 ATGGAGTTTGAGCTTGAGAACCCCTTTGATGAGAACTACCATAACCTTCCCTTTGAAGCTGTCTCCTCCCTCTTCCACATTGAATCTGAACACATCCCTCCCTCCAATTACTTCCACACTCTCAAGGCCACTGATTTTGATATCTCTCTTAGAACACATCTCATTTCCTTCATATCACAGTTGTCCTGCACCTTTGATCCGGTTCTGCCTTACCTTGCTACCAACTATCTAGATCGCTATCTCGCCAACCAACCCATATTGCAACCAAAGCCATGGACCAACAAGCTTCTTGCAATCTCTTGCTTCTCTCTAGCTGCTAAGATGCTAAAGATAGAGTATTCTCCCACTGATGTTCAGGTTCTTGTGAACAATCATGGTGATGGTGGTGTCATATTTGAGGCACAAACAATACAAAGAATGGAGGCCATTGTGTTGGGGACACTACAATGGCGCATGCGTTCCATAACACCATTCTCATTCATCCCTTTCTTCATCAACTTGTTGGGCATCAATGACCCTTCATTCAACCAGGTACTCAAAGATAGGGCCTCCCAGATCATATTGAAGTCACAAACAGAGATAAAGGTTTTAGAATTCAAGCCATCTGTAATTGCAGCATCAGCTCTACTGTCTGCTTCACATGAGTTGTTTCCCTTTCAGTATCCATGCTTCTTTAGAGCAATATCTGATTCTTCATATGTAAATAAAGAAAGCATGTTGCAGTGCTATAATGTGATACAGGAAATGGGTAGAGAGGAGTACGAATCATCTGTGTTGAATGTGAATTCAAGCTCAGACACACCGGTTAATGTATTGGATGAACATTTTCTGAGCTTGGAAGAAAGTGAAAAAACCAACATTGCTCCCACCACACACAATAAGGACCTCAAAAGAAGATCAAAGTTCACTGCTTATGGTAACAACAACAACAACAACAACCACTCCCTCCATTCTCACCATCAATGCTAG 969 0.42 MEFELENPFDENYHNLPFEAVSSLFHIESEHIPPSNYFHTLKATDFDISLRTHLISFISQLSCTFDPVLPYLATNYLDRYLANQPILQPKPWTNKLLAISCFSLAAKMLKIEYSPTDVQVLVNNHGDGGVIFEAQTIQRMEAIVLGTLQWRMRSITPFSFIPFFINLLGINDPSFNQVLKDRASQIILKSQTEIKVLEFKPSVIAASALLSASHELFPFQYPCFFRAISDSSYVNKESMLQCYNVIQEMGREEYESSVLNVNSSSDTPVNVLDEHFLSLEESEKTNIAPTTHNKDLKRRSKFTAYGNNNNNNNHSLHSHHQC* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0806 322 CDD CYCLIN 50 145 IPR013763 -
Ahy18g0806 322 Pfam Cyclin, C-terminal domain 155 257 IPR004367 -
Ahy18g0806 322 SMART cyclin_7 52 146 IPR013763 -
Ahy18g0806 322 Pfam Cyclin, N-terminal domain 22 152 IPR006671 -
Ahy18g0806 322 Gene3D - 23 244 - -
Ahy18g0806 322 Gene3D - 34 153 - -
Ahy18g0806 322 PANTHER CYCLINS 11 304 IPR039361 -
Ahy18g0806 322 SUPERFAMILY Cyclin-like 19 152 IPR036915 -
Ahy18g0806 322 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 11 304 - -
Ahy18g0806 322 SUPERFAMILY Cyclin-like 137 251 IPR036915 -
Ahy18g0806 322 SMART Cyclin_C_2 155 271 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0806 Ahy-Chr18 9371214 9373596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0806 1 301 Core Cell Cycle Gene Families AT4G03270 42.812 9.46e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0806 K18812 - gmx:100799951 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0806 18 9371214 9373596 Ahy18g0806 18 9371214 9373596 ECH
Ahy18g0806 18 9371214 9373596 Ahy8g1576 8 32742494 32744889 hybridization
Ahy18g0806 18 9371214 9373596 Ahy13g1488 13 20502790 20504979 PCT
Ahy13g1488 13 20502790 20504979 Ahy18g0806 18 9371214 9373596 PCT