Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0793 ATGAAGAGCTGCGAGTTGTGCAAGGTTCCGGCCAGGACCTTCTGCGAGTCCGACCAGGCCAGTCTCTGTTGGGACTGCGACGCCAACGTTCACGGTGCTAACTTCCTCGTCGCCAGGCACACAAGAACCCTCCTCTGTCACGCCTGCCAGTCACCCACGCCCTGGAAGGCTTCCGGCGACAGGTTAGGCAACACCGTCTCGCTTTGTGAGATGTGCGCCGGCGGCAACAAGGTCTCCGCGGAGGAGAGCGAAGGAGGCAATGACGACGACATAGACACCGAGGACGACGATCTTGAAGACGAAGAAGAGGAAGAGGATGATGACGATGACGAGGTTCCCGCCGACGACGAGGAGGAAGAAGACGGGGACAACCAGGTGGTGCCTTGGTCCTCTACGGCGCCGCCCCCGCCGGCTCCGAGCTCATCCAGCAGCGAAGAGTCGGTCAGCCGCCGGTGCAACCACGCCGACGAAGAGGATTTTTCTGAGGCAGTTCCCTTAAAACGGCATCGTCACGATGTGGATCATGATGATTTTCTGGAGGGTTCGAAAGCTTGGAGATATAAACGGAGATACGGGGGGGAGTGGAGAAAGGAGGTTGGTTGGTTAGGATACGGCGGCGGAGCACGGCGTTGA 633 0.594 MKSCELCKVPARTFCESDQASLCWDCDANVHGANFLVARHTRTLLCHACQSPTPWKASGDRLGNTVSLCEMCAGGNKVSAEESEGGNDDDIDTEDDDLEDEEEEEDDDDDEVPADDEEEEDGDNQVVPWSSTAPPPPAPSSSSSEESVSRRCNHADEEDFSEAVPLKRHRHDVDHDDFLEGSKAWRYKRRYGGEWRKEVGWLGYGGGARR* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0793 210 MobiDBLite consensus disorder prediction 78 168 - -
Ahy18g0793 210 MobiDBLite consensus disorder prediction 149 168 - -
Ahy18g0793 210 MobiDBLite consensus disorder prediction 85 124 - -
Ahy18g0793 210 CDD Bbox1_BBX-like 4 45 - -
Ahy18g0793 210 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Ahy18g0793 210 PANTHER - 1 182 - -
Ahy18g0793 210 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Ahy18g0793 210 SMART bboxneu5 1 45 IPR000315 GO:0008270
Ahy18g0793 210 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0793 Ahy-Chr18 8970164 8971642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0793 2 138 C2C2-CO-like Transcription Factor Family AT4G27310 46.626 1.07e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy18g0793 zf-B_box 2.10E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0793 - - gmx:100801024 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0793 18 8970164 8971642 Ahy18g0793 18 8970164 8971642 ECH
Ahy18g0793 18 8970164 8971642 Ahy8g1567 8 32550994 32552491 hybridization
Ahy18g0793 18 8970164 8971642 Ahy13g1471 13 19901880 19903282 PCT
Ahy13g1471 13 19901880 19903282 Ahy18g0793 18 8970164 8971642 PCT