Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0788 ATGCGAACTACTCTTGTAGTTTTCCTTGTTTCATTGCTGCAATGCACTTCTCAAGTGGTTGTAGCAAAAGATATTATGGAGTCTGGCCAAAACATAACTTCAGAATCTTCATCAAGCTTTCTTGTTTCAGCTGGACAGAGATTTGTACTAGGCTTCTTTCCTCGTCCCGAAAACAAATCAGAAAGTTACCTGGGGATATGGTACAACAGTGATCAAACACAATACCCTGGAAAACAAACAGTGGTATGGGTTGCCAACAGAGACATTCCTGTTGTGAGTTCCAATGTTGGAGTCTTTCATATTGCAGATGATGGAAACCTTGTACTAGAAGATGCATCGAGTAAAGGACGCTATTGGTCCACATCAATAAGCTCTGCATCCACGGCGACGAACAAAACAAGGAGAGTGCAGCTAATGGATTCTGGGAATCTGGTATTGTTCCATGAAGAAGAAGATGGAGATTACATATGGCAAAGCTTCCAACACCCCACAGACACGTTTCTTCCGGGAATGCAGATGGACATGGATGGCATGGAATTAAGGAGTGGAAACTTCACCTTCAAGATGGTTCCAACTCAAAATTATCGGAAGAAGCGTTATGTCATCTACTTGAATGATCAACTCTATTGGGAAAATGATGGACTCAATTCAGATGCACTGAGCCCTGACAAACTCGAATATTTAACTAACTGGACAGAGATCGATATCCCTACGTCTTCACGTACGAAAGGTGTGAATCGGACGATGAAACTTTCAGCCACTATGAACAAATCCAGCACTGGGACCTGGGAAACCTTTTATAAGAAATACATGAACACAAGAATTGTGATGAACTCTTCAGGGGAGATACAGTATCTGAAGTGGGAAGAGGAAGACTCTACAGGTGCAGGATGGACGATGTTATCGAACCAGCCATCGGACAAGTGCCATATATATAATTTTTGCGGCAACTTTAGTAGCTGCGACATTGCAGATGATTTGAGGATCTGCAAATGTTTACCAGGGTTTAAGGAGAATCAGATTCAGAGCGATGAGGGAGGGTCCAGATTCCCAGGATGTAACAGAAGTACACTATCACTGTCTGACAGCAGAGGCATGATGTTCATTAACTTGACCATGGTGAGAGTGACCGCACCAGACTTCAAATCCCCCGCAGAAAGCGAAGATGAATGCCGGATTTCGTGCCTTCACATGCATCTTCCCCGGTGCCAAGCTTATTCGTATAATCGCTCTGTTTCAGATTATGATCGTGTTCCTCTCACATGTGGAATTTGGACACAGGATTTAACTACTCTTCAAGTGGTCCAAGATGATGGTGCTGCTACTGCTTCTCTTTCTGTTCTGGTCAACCGTTCAGATATAGCACCAAAGGCAAAATCTTGTGAGCCTTGTGGTATATACGTAATTCCTTATCCCCTAAGCACTGGACCAAGCTGTGGGGATGCCACCTACAACAAGTTCATCTGCAACAACTCAACAGGGCAGCTTAACTTCACAATCCCCAGTGGAGAATCGTACCGAGTTACTTGGGTAGACCAAAATACTAGAAGGTTTTACATTCAAACCAGCAATTCTTATCGCTGTGATTCCAGCAGTCAAAATAGAGTCCTTGATCCTCCCTTTAATGTCACCAACTGGTGCTACGGAGCAGATGAAATTGAGGTCAGTTGGGATCCAGCGCCAGAACCCCCCTGTAATCACCTCACAGACTGCAATGGTTGGCCTCATTCAACATGCCGACAAAAATTTCATCCAGGGGAAAAGAGGTGCTTTTGCCATTCAAAATATCACTGGGATGCCTCAACTCTTAGTTGTACTCAAGGAGAGGAATCAAAAAACCACAAATTGCTATTGGTTGTAACTCTTACAGTCATGCTTTTGCTAGCATTTCCAGTGATATTTGCATATGTATGGAGAATCAAGACAAACCCCAAGATTGACAGGGCGAACATTCTAATACAGGAGAGCTTGCATGATAGTGAAAGACAAGTCAAAGGTTTGATAGGTTTGGGAGGTTTAGAAGACAAACACAGTGAAAGCATTGAAGTGCCTTTTTATACTTACAGAAGCATTGTAGCAGCTACTGATAATTTCTCTGAGTCAAACAAGCTTGGAAGAGGAGGTTATGGACCAGTCTACAAGGGAAGGTTTCTCGGAGGCCAAGATATTGCTGTAAAAAGGCTTTCAAGTTTTTCAACACAAGGCTTAGAGGAATTCAAAAATGAGATTGTTTTGATTGCCAAACTCCAACATCGGAACCTTGTTAGACTCAGAGGCTATTGCATAAAGGGAGATGAGAAGATTTTACTTTATGAATACATGCCGAACAAGAGCTTGGACTCTTTCATATTTGACCGTTCAAGAACTTTACTCCTTGAATGGCCAATGCGGTTTGACATAATCCTAGGCATTGCACGAGGATTGCTTTATCTTCACCAAGACTCTAGACTAAGAATAATTCATAGAGATCTAAAATCTAGCAACATTCTTCTAGATGAGGATATGACTCCAAAGATTTCAGACTTCGGCCTTGCAAAAATATTTGGAGGGAAAGAGACCGAAGCAAGCACAGAGAGAGTTGTGGGAACCTATGGATATATGGCACCAGAATATGCTTTGGACGGGTATTTTTCAATCAAATCCGATGTTTTCAGCTTTGGTGTAGTCTTATTAGAGATTCTCAGTGGAAAAAAGAACACAGGATTCTTTCAATTCAAACAAACTGCTACCCTTTTGGGATATGCATGGGGACTATGGACAGAGAATAGACTTATGAATTTAATGGATACATCTTTCAGTGGAACTTGCAATGAGAATCAATTTACGAAGTGTGCACAAATTGCACTCTTGTGTGTGCAAGATGAACCAGGTGATCGACCAACCATGTCAACTGTTGTGACAATGCTTGATAGCGAAATTGCAACCATCCCTATTCCTACGCAACCAACATTTTATGCAATTAGAAGGACTACAAGCACTACTGCATCTTCTTCGAGCAGACCAGAAACAACCATGCAAATTGAGAGCAGTTATCAAGAAGGGAGATAG 3048 0.4213 MRTTLVVFLVSLLQCTSQVVVAKDIMESGQNITSESSSSFLVSAGQRFVLGFFPRPENKSESYLGIWYNSDQTQYPGKQTVVWVANRDIPVVSSNVGVFHIADDGNLVLEDASSKGRYWSTSISSASTATNKTRRVQLMDSGNLVLFHEEEDGDYIWQSFQHPTDTFLPGMQMDMDGMELRSGNFTFKMVPTQNYRKKRYVIYLNDQLYWENDGLNSDALSPDKLEYLTNWTEIDIPTSSRTKGVNRTMKLSATMNKSSTGTWETFYKKYMNTRIVMNSSGEIQYLKWEEEDSTGAGWTMLSNQPSDKCHIYNFCGNFSSCDIADDLRICKCLPGFKENQIQSDEGGSRFPGCNRSTLSLSDSRGMMFINLTMVRVTAPDFKSPAESEDECRISCLHMHLPRCQAYSYNRSVSDYDRVPLTCGIWTQDLTTLQVVQDDGAATASLSVLVNRSDIAPKAKSCEPCGIYVIPYPLSTGPSCGDATYNKFICNNSTGQLNFTIPSGESYRVTWVDQNTRRFYIQTSNSYRCDSSSQNRVLDPPFNVTNWCYGADEIEVSWDPAPEPPCNHLTDCNGWPHSTCRQKFHPGEKRCFCHSKYHWDASTLSCTQGEESKNHKLLLVVTLTVMLLLAFPVIFAYVWRIKTNPKIDRANILIQESLHDSERQVKGLIGLGGLEDKHSESIEVPFYTYRSIVAATDNFSESNKLGRGGYGPVYKGRFLGGQDIAVKRLSSFSTQGLEEFKNEIVLIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRSRTLLLEWPMRFDIILGIARGLLYLHQDSRLRIIHRDLKSSNILLDEDMTPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGYFSIKSDVFSFGVVLLEILSGKKNTGFFQFKQTATLLGYAWGLWTENRLMNLMDTSFSGTCNENQFTKCAQIALLCVQDEPGDRPTMSTVVTMLDSEIATIPIPTQPTFYAIRRTTSTTASSSSRPETTMQIESSYQEGR* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0788 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Ahy18g0788 1015 Gene3D Transferase(Phosphotransferase) domain 1 774 976 - -
Ahy18g0788 1015 SUPERFAMILY Protein kinase-like (PK-like) 680 1007 IPR011009 -
Ahy18g0788 1015 ProSiteProfiles PAN/Apple domain profile. 353 447 IPR003609 -
Ahy18g0788 1015 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 212 IPR036426 -
Ahy18g0788 1015 SMART blect_4 23 163 IPR001480 -
Ahy18g0788 1015 Gene3D - 17 161 IPR036426 -
Ahy18g0788 1015 Pfam S-locus glycoprotein domain 249 339 IPR000858 GO:0048544
Ahy18g0788 1015 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 1013 - -
Ahy18g0788 1015 CDD STKc_IRAK 704 970 - -
Ahy18g0788 1015 ProSiteProfiles Protein kinase domain profile. 698 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0788 1015 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 1013 - -
Ahy18g0788 1015 Gene3D Phosphorylase Kinase; domain 1 673 773 - -
Ahy18g0788 1015 CDD B_lectin 40 163 IPR001480 -
Ahy18g0788 1015 Pfam D-mannose binding lectin 80 177 IPR001480 -
Ahy18g0788 1015 MobiDBLite consensus disorder prediction 991 1015 - -
Ahy18g0788 1015 ProSiteProfiles Bulb-type lectin domain profile. 33 159 IPR001480 -
Ahy18g0788 1015 Pfam Protein tyrosine and serine/threonine kinase 701 969 IPR001245 GO:0004672|GO:0006468
Ahy18g0788 1015 SMART serkin_6 698 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0788 Ahy-Chr18 8898309 8902632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0788 674 984 Receptor kinase-like Gene Family AT4G23230 56.270 1.29e-119 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g0788 PK_Tyr_Ser-Thr 4.50E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0788 - - aip:107612578 2060.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0788 18 8898309 8902632 Ahy8g1565 8 32523623 32528956 hybridization
Ahy18g0788 18 8898309 8902632 Ahy13g1467 13 19787492 19792324 PCT