Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0763 ATGATTTTGAGCCTTAGAGTTTTACTTATAAGTTCACACACAAGCACTTGTTGTTTCTTCTCACTCCCTCTCAATATGGACATAGATTCTTCAGGAGGCACATCCAATTGGCTCTACGATTATGGCTTTGATAACATCTCTGTTGCTGACTTCATGGCTCCAGACTCTGCTGCTTTCACCTGGCTGCCTCAACCTCAGCCACACACCAATTTCAAGCCTCCTTCTTCCAATATCAGCTTGGAAATGGAATACTCAGTGGATTCAATTGTGCTGGAAGGTGGCCCTTCAAAGCGGTTGAGGACTGAATCATGTGCATCTGGAACCAAGGCATGTCGAGAGAAATTGCGAAGGGACAAACTGAATGAGAGGTTTCTGGAACTGAGTTCCATCTTGGAGCCTGGTAGCATGCAGCCCAAAACCGACAAGGTTGCCATATTAAGTGATGCCGTCCGAGTCGTAAACCAATTAAGAGATGAAGCAGAGAAGCTGAAGGAAATGAATGATGAAATGCTTGAAAAAATTAAAGAGCTCAAGGCTGAGAAGAATGAGCTTCGGGATGAGAAAAATAGGCTCAAGGTAGAGAGAGAGAAGTTGGAGCAGCAATTCAAGATGACAAATGTTCAGCCAAGCTTCCTCCATCATGCTCCGGCCGCCACGAAAGCACAAGGTGCTAGCCAAAAGCTGATACCCTTCATAGGTTACCCTGGCATAGCCATGTGGCAGTTTATGCCCCCAGCTGCAGTTGATACATCAAAGGATCATCTCCTTCGTCCACCAGTGGCATAA 786 0.458 MILSLRVLLISSHTSTCCFFSLPLNMDIDSSGGTSNWLYDYGFDNISVADFMAPDSAAFTWLPQPQPHTNFKPPSSNISLEMEYSVDSIVLEGGPSKRLRTESCASGTKACREKLRRDKLNERFLELSSILEPGSMQPKTDKVAILSDAVRVVNQLRDEAEKLKEMNDEMLEKIKELKAEKNELRDEKNRLKVEREKLEQQFKMTNVQPSFLHHAPAATKAQGASQKLIPFIGYPGIAMWQFMPPAAVDTSKDHLLRPPVA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0763 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 104 156 IPR011598 GO:0046983
Ahy18g0763 261 Coils Coil 146 208 - -
Ahy18g0763 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 96 170 IPR036638 GO:0046983
Ahy18g0763 261 CDD bHLH_AtILR3_like 109 185 - -
Ahy18g0763 261 Pfam Helix-loop-helix DNA-binding domain 108 156 IPR011598 GO:0046983
Ahy18g0763 261 Gene3D - 106 185 IPR036638 GO:0046983
Ahy18g0763 261 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 26 261 - -
Ahy18g0763 261 PANTHER BHLH TRANSCRIPTION FACTOR 26 261 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Ahy18g0763 261 SMART finulus 110 162 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0763 Ahy-Chr18 8394496 8396784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0763 89 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51070 61.236 1.10e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g0763 HLH 8.00E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0763 - - aip:107613798 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0763 18 8394496 8396784 Ahy18g0763 18 8394496 8396784 ECH
Ahy18g0763 18 8394496 8396784 Ahy8g1544 8 32228972 32231278 hybridization