Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0745 ATGGACGACATAGATCACTCTTCTTCTTCTTCTTCTTCTCAACATGTTTCTGCAAACTCTACAGAACAAGTGTCCAATCGAGCTTCCAAGGTTGAATTTTCGGAGGATGAGAAAACTCTTATTTCCAGGATGTATAAACTTGTTGGGGACAGGTGGCCCTTAATTGCCGGAAGAATTCCCGGAAGAACAGCTGATGAAATAGAGAAGTATTGGACTTCAAGATACTCATCAAGAAACGAATAA 243 0.4033 MDDIDHSSSSSSSQHVSANSTEQVSNRASKVEFSEDEKTLISRMYKLVGDRWPLIAGRIPGRTADEIEKYWTSRYSSRNE* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0745 80 CDD SANT 32 71 IPR001005 -
Ahy18g0745 80 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 8 77 - -
Ahy18g0745 80 Gene3D - 32 80 - -
Ahy18g0745 80 SUPERFAMILY Homeodomain-like 31 75 IPR009057 -
Ahy18g0745 80 Pfam Myb-like DNA-binding domain 30 72 IPR001005 -
Ahy18g0745 80 ProSiteProfiles Myb-like domain profile. 25 75 IPR001005 -
Ahy18g0745 80 SMART sant 29 77 IPR001005 -
Ahy18g0745 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 8 77 - -
Ahy18g0745 80 MobiDBLite consensus disorder prediction 7 28 - -
Ahy18g0745 80 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0745 Ahy-Chr18 8226115 8227681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0745 24 78 MYB Transcription Factor Family AT5G14750 41.818 1.42e-13 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy18g0745 Myb_DNA-binding 1.40E-06 CL0123