Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0744 ATGAACGACCTTCTTACTGATTCGTTTGCTGATGAAGGTAATCATGGTCAGCCTTCTAGACAAGGTGATATTGAAATGGGAATGCAGGTTCAGAGAAGCAACTCTGATCTGGGAATGGAAGCTTTTAATAAGCAGATCCATGAGGTCGACAAACAAATCGATAAGCTCTCTGGGCTACTTCAAAAGCTAAAGGAAGCTAATGAAGAATCAAAAGCCGTTACAAAAGCATCTGCTATGAAAGCTATCAAGAAGAGGATGGAGAAGGATATTGATGAAGTTGGAAAGATTGCACATGGTGTCAAAACAAAAATAGAAGCTATAAACAGAGATAACTTAAACAACAGAAAAAAGCCTGGTTGTGAGAAGGGAACGGGTATTGACAGAGCGAGGATGAATATGACAAATGCCTTAACTAAAAGGTTCAAGGATCTAATGACAGAGTTTCAGACTCTTAGACAAAGAATACAAGATGAATATCGTGAGGTTGTTGAGAGAAGAGTTATTACAGTCACTGGAACTAGGCCAGATGATGAGACAATTGATCACCTGATTGAAACTGGAAATAGTGAACAAATCTTCCAGAAGGCAATTTTAGAAGCAGGCCGAGGACAGGTTGTAAGCACAGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAAATTGAGAAAAAGCTTCTTGATTTGCACCAGATTTATCTCGACATGGCAGTCTTGGTTGATGCTCAGGGAGAGATTTTAGACAACATCGAAAGCCAGGTGACAAACGCAACTGATCATGTTAGATTGGGAAACGATGCTCTTCAAACTGCAAAGAGTTATCAAAAGAGGTCAAGAAAATGCATGATCATTTCTGTTATACTGGTCTTGATCATCGCCGCCATTATCGTGATCCCCATTTTGAAAACAAGGAAGAAGTGA 921 0.3963 MNDLLTDSFADEGNHGQPSRQGDIEMGMQVQRSNSDLGMEAFNKQIHEVDKQIDKLSGLLQKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKTKIEAINRDNLNNRKKPGCEKGTGIDRARMNMTNALTKRFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQKAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVTNATDHVRLGNDALQTAKSYQKRSRKCMIISVILVLIIAAIIVIPILKTRKK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0744 306 PANTHER SYNTAXIN 12 301 IPR045242 -
Ahy18g0744 306 MobiDBLite consensus disorder prediction 1 25 - -
Ahy18g0744 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
Ahy18g0744 306 Gene3D - 34 163 - -
Ahy18g0744 306 Pfam Syntaxin 42 244 IPR006011 GO:0016020
Ahy18g0744 306 Pfam SNARE domain 245 297 IPR000727 -
Ahy18g0744 306 SMART tSNARE_6 204 271 IPR000727 -
Ahy18g0744 306 Gene3D - 203 302 - -
Ahy18g0744 306 CDD SNARE_syntaxin1-like 208 270 - -
Ahy18g0744 306 SMART SynN_4 34 160 IPR006011 GO:0016020
Ahy18g0744 306 Coils Coil 46 76 - -
Ahy18g0744 306 CDD SynN 39 196 IPR006011 GO:0016020
Ahy18g0744 306 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 12 301 - -
Ahy18g0744 306 SUPERFAMILY t-snare proteins 37 264 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0744 Ahy-Chr18 8213338 8221198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0744 1 302 SNARE and Associated Proteins AT3G03800 59.603 1.91e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0744 K08486 - gmx:100800991 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0744 18 8213338 8221198 Ahy18g0744 18 8213338 8221198 ECH
Ahy18g0744 18 8213338 8221198 Ahy8g1527 8 32078530 32086207 hybridization