Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0718 ATGATCTCCAATATTAACAAGAACAATGAGGATGGTAAGTCTTGGAGAGATGATTTGAGAAAGGGGCCTTGGACGCCGATAGAGGATGCCATACTTATCGAGCAGGTAAAGAAGTGTGGCGAAGGTAATTGGAGTTTAATTCAAAAGAATTCTGAGTTGAGGAGAAATGGCAAAAGTTGTAGGCTTAGATGGTTGAACCATCTCAGGCCTGACTTGAAGAAGGGTCCTTTCTCTGAAGAAGAGGAGAAACTCATCGGTGATCTTCATGCTAAGATTGGAAACAAATGGGCTCTAATGGCTACCGAGGTTCCTGGAAGATCAGACAATGACATAAAAAACTTTTGGAACACAAGAATGAAGAAGCGCCTAAGAGAATATCCTCCACAAATAACGGTTCAAGAAGCACAACACTTTTCTTCATCACCATTTTATTCGGTCTTAGCTTCATGTTACCCTAAAAATAATCTCAGTGTTGAACTACCTTCAAACATTTCTGCTGCCAATCCTCCACCAAATCATAATCAGAAACAACCTAATCAAAATTATTATTCTTCTTCTTCTTCCTCTTGCACCAATAATAATGCAAGTTTTATATTGCCATTAGCCCCTATGTCTCCTTATTGTAAGAGTAGTGGTTTATTGAATGATGTGGTGATGGAGGGTAATGCTCTTTGTCGCAAGGGAAAGTCAAAGATGGATGCAGCCATTGTTATTGTTAGGGAGGAAGAAGAATTAGCTGATAAGAGGAAAATTATTGAAGAAGGTGAAGAGCCACCATTGCCACCAGTTGGAACTAGTAAAGAGGAAGAAACAACCACCATTATTGCAACTCAAAGCTCTTCTCATCAATTGATTTCAACAGAGAAGAATGATAATGGAGGTTGTAACAATAACAAGGAGGCATTGAATAATTCTATGCCACAAATGGACGATGAATTGCTTAGCATACTTAAAAATTGTCCAATATATTCGCCAGTGCGAAAGTGGTACAAAGTTGATGATGATGAGGACTTCCCTGATGATGATGATGATGGATTTGAATCTTGTTGA 1050 0.3876 MISNINKNNEDGKSWRDDLRKGPWTPIEDAILIEQVKKCGEGNWSLIQKNSELRRNGKSCRLRWLNHLRPDLKKGPFSEEEEKLIGDLHAKIGNKWALMATEVPGRSDNDIKNFWNTRMKKRLREYPPQITVQEAQHFSSSPFYSVLASCYPKNNLSVELPSNISAANPPPNHNQKQPNQNYYSSSSSSCTNNNASFILPLAPMSPYCKSSGLLNDVVMEGNALCRKGKSKMDAAIVIVREEEELADKRKIIEEGEEPPLPPVGTSKEEETTTIIATQSSSHQLISTEKNDNGGCNNNKEALNNSMPQMDDELLSILKNCPIYSPVRKWYKVDDDEDFPDDDDDGFESC* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0718 349 MobiDBLite consensus disorder prediction 1 20 - -
Ahy18g0718 349 Gene3D - 76 139 - -
Ahy18g0718 349 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Ahy18g0718 349 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 9 200 - -
Ahy18g0718 349 SMART sant 73 121 IPR001005 -
Ahy18g0718 349 SMART sant 20 70 IPR001005 -
Ahy18g0718 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Ahy18g0718 349 MobiDBLite consensus disorder prediction 162 187 - -
Ahy18g0718 349 CDD SANT 76 117 IPR001005 -
Ahy18g0718 349 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Ahy18g0718 349 CDD SANT 23 68 IPR001005 -
Ahy18g0718 349 Gene3D - 21 73 - -
Ahy18g0718 349 Pfam Myb-like DNA-binding domain 24 83 - -
Ahy18g0718 349 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Ahy18g0718 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 123 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0718 Ahy-Chr18 7749441 7752876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0718 16 134 MYB Transcription Factor Family AT3G11440 63.415 9.72e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy18g0718 Myb_DNA-bind_6 2.90E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0718 K09422 - ahf:112771967 571.237