Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0708 ATGGAGTGGATTAGAGGCCAAATCATAGGCCAAGGCTCCTCAGCCACCGTATGCCTAGCTGGCACCACCACCTCTGCCGCCGTCTGTGCCGTCAAGTCAGCAGAGCTCTCACAATCACAACACCTCCAAAGAGAACAAAAAATCTTGTCCTCACTCTCTTCACCACACATAGTAACCTACAAAGGCTTTGATATCACAAAAGAGAAAAGCAAGCTCATGTTCAACCTCTTCATGGAGTATATGCCCCATGGAACACTCTCTAACCACGGTGGCCGCCTCCTGGAGCCGGCGATTGCACACTACACAAAGCAAGTTCTAAAGGGGCTAGAATACTTGCACTCAAGAGAGTTGGTGCATTGTGACATAAAGGGTAGTAACATCCTTGTTGGTGAAGGTAACTGTGTCAAAATTGCTGACTTCGGATTAGCAAAGAGCCTAAATGAGTCAGCCCGGGTGCCACTGGCTGGCACCCCGGCTTTCATGTCGCCGGAGGCGGCTCGGGGGGAGGAGCAGGGGTACCCTTGTGATGTTTGGGGAATTGGATGCACTGTGATTGAGATGGCCACTGGTTGTTCACCATGGCCTAAAGTTAAGGACCCTGTTTCAATGCTGTACCATGTTGGATATTCCGGTGAGGTTCCTGAGATTCCGGGGTTTCTTTCTGAAGAAGCAAAGGATTTCTTGGAGAAGTGTCTTAGGAGGAATCCAAGAGAAAGATGGAGTGCTAGCCAATTGCTGAATCATCCATTTCTTGGGGAATTCAGTTCCAAAGATGGTGATTGTGTTCTTGGGGAATCCAATAGTTCATCATGGTCTCCTACTAGTATTCTTGATCAAGGATTTTGGAATTCTGTGGAGGAATCAGAATGCCCCATTGCTGGGGATTTTGTTCAAACATGTTGTGTGCATTCCGCTTCTGATAGGATCAAGAAGCTGGCTCTGTGTTCTGGTGACCCCAATTGGAATTGGGAAAGTGAGAATTGGATCACAACTAGAGGGAATAACAATAACGAGAGTTCTTGTTCTTGCATTGGTGGATCAATGATAGCTTCAAGTTCAGCTAGTGATTGTTGGTGTGAGGTGGAGAAAAGTAATAATAATAATAATAATGACGATGATAATGTTATTAATAGTAATTGTAGAATTAATAGTTGTTTTTATGAGGATTTTAAATGTAGGGATGTTAGGGTTGTAGTAAATAGTGTCAATTTTCAGAAAATGCATCCTTTGACATTAGATATTTTATAG 1248 0.4423 MEWIRGQIIGQGSSATVCLAGTTTSAAVCAVKSAELSQSQHLQREQKILSSLSSPHIVTYKGFDITKEKSKLMFNLFMEYMPHGTLSNHGGRLLEPAIAHYTKQVLKGLEYLHSRELVHCDIKGSNILVGEGNCVKIADFGLAKSLNESARVPLAGTPAFMSPEAARGEEQGYPCDVWGIGCTVIEMATGCSPWPKVKDPVSMLYHVGYSGEVPEIPGFLSEEAKDFLEKCLRRNPRERWSASQLLNHPFLGEFSSKDGDCVLGESNSSSWSPTSILDQGFWNSVEESECPIAGDFVQTCCVHSASDRIKKLALCSGDPNWNWESENWITTRGNNNNESSCSCIGGSMIASSSASDCWCEVEKSNNNNNNDDDNVINSNCRINSCFYEDFKCRDVRVVVNSVNFQKMHPLTLDIL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0708 415 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0708 415 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0708 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Ahy18g0708 415 CDD STKc_MAPKKK 2 251 - -
Ahy18g0708 415 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 350 - -
Ahy18g0708 415 Gene3D Transferase(Phosphotransferase) domain 1 2 278 - -
Ahy18g0708 415 PANTHER MAP KINASE KINASE KINASE 1 350 - -
Ahy18g0708 415 SUPERFAMILY Protein kinase-like (PK-like) 3 255 IPR011009 -
Ahy18g0708 415 Pfam Protein kinase domain 6 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0708 415 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0708 Ahy-Chr18 7507923 7509433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0708 3 349 MAP Kinase Kinase Kinase AT5G55090 49.322 4.26e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy18g0708 Pkinase 1.30E-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0708 K20716 - gmx:100797801 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0708 18 7507923 7509433 Ahy18g0708 18 7507923 7509433 ECH
Ahy18g0708 18 7507923 7509433 Ahy8g1500 8 31547640 31549145 hybridization
Ahy18g0708 18 7507923 7509433 Ahy13g1383 13 17266371 17267734 PCT
Ahy13g1383 13 17266371 17267734 Ahy18g0708 18 7507923 7509433 PCT