Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0707 ATGGATAACACCACTCTCACCACCACCACCACCGCCACCGCCACCAATTCACTTAAGCCCTTCCAAGTCAACCTCACCTGCTCCCTCCACCACCATGACAAGAGACCTCTCATTGATGAACACGACTTCTTCTCTGCCTCTGCCTCTGCCCCTCCTCCTCATCACCGCCACCACAACACCATGAATTCTGATATCTTGGATTCCAAAGTAAACACTGGTCTGAATCTTCTTACTACCAACACGAGCAGCGATCAATCCGTTGTCGACGATGACATCTCACCGAATTCACACCAGAAAAGACCCGTCCCTGATCAGACGGTTGTTATTCTGGCGGAGCTGGAGCGAACGAAGGCGGAGAATCAACGGTTGAGAGAGAGGCTTGATCGTGTAACCGCGGAATACAAGGCCCTGCAGATGCAAGTGGTGGCTTTGATGCAACAACACAAGCCAGAGGAGGAGGAGGAGAAGAAGCAAGACGCAGCTCCAAGACAGTTCATGGATCTTGGATTGGCCACTAACGGTGCTGAGACGGGGGAGGAGGCTTCGCTTTCTTCGTCGGAGAGGTCCAAGTCTCCAGAGAGGAAGAATGGAAGCAGTGATGATCAAGAAAAGAATAGCAGAGAGGATAGTCCCTCGGCTCCAAGAAATGTTGATCAAGCTGAAGCCACTATGAGAAAAGCCAGAGTCTCTGTTAGAGCTAGATCAGAGGCTCCAATGATGACGGATGGATGCCAATGGAGGAAATATGGGCAGAAGATGGCAAAAGGAAACCCATGTCCAAGAGCATACTACAGATGCACCATGGCTGCAGGTTGCCCTGTTAGAAAACAGGTACAAAGGTGTGCTGAGGACAGAACAATACTAGTAACAACATATGAAGGGAATCACAACCACCCTCTGCCACCAGCAGCAATGGCAATGGCACAAACAACATCTTCAGCAGCAAGAATGCTTCTCTCGGGATCAATGTCAAGCAGTGATGGCCTTATGAATGCTAACTTCCTAACAAGGACACTCCTTCCTTGCTCCTCAAGCATGGCCACAATCTCAGCCTCAGCACCATTCCCAACTGTCACTTTGGACCTCACTCACTCCCCTAACCCTTTGCAATTCCCAAACCACCAAAACCACTTCCAATTACCATTCCCTCACTCACCTAACCCTTCTTCATTGCTGCCTCACATCTTTGGCCACGCTCTTTATAACCACTCTAAGTTCTCAGGCCTTCAACTCTCTCAGGATGCTGATCCTTCTTCTCAGCCTCCCCCGCCGCCTCCTCCGCAGCTCGCAGATTCAGTTAGTGCTGCCACTGCTGCCATTGCAGCTGATCCTAACTTCACTGCTGCTTTGGCAGCTGCTATTACTTCCATTATTGGAGGTGCACAACACCAAAACAATAATGGCAACACCAACAATAGCACTGTTGCTAATAATGGCAACAACACTAGTACTCCCAACAACAATACCAATGGAAGCAATAATAATATCAACAGTTCCAATTTCTCATCAGAGAACTAG 1518 0.4908 MDNTTLTTTTTATATNSLKPFQVNLTCSLHHHDKRPLIDEHDFFSASASAPPPHHRHHNTMNSDILDSKVNTGLNLLTTNTSSDQSVVDDDISPNSHQKRPVPDQTVVILAELERTKAENQRLRERLDRVTAEYKALQMQVVALMQQHKPEEEEEKKQDAAPRQFMDLGLATNGAETGEEASLSSSERSKSPERKNGSSDDQEKNSREDSPSAPRNVDQAEATMRKARVSVRARSEAPMMTDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSSDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTHSPNPLQFPNHQNHFQLPFPHSPNPSSLLPHIFGHALYNHSKFSGLQLSQDADPSSQPPPPPPPQLADSVSAATAAIAADPNFTAALAAAITSIIGGAQHQNNNGNTNNSTVANNGNNTSTPNNNTNGSNNNINSSNFSSEN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0707 505 MobiDBLite consensus disorder prediction 410 431 - -
Ahy18g0707 505 SMART WRKY_cls 240 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g0707 505 MobiDBLite consensus disorder prediction 465 505 - -
Ahy18g0707 505 ProSiteProfiles WRKY domain profile. 235 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g0707 505 Coils Coil 110 147 - -
Ahy18g0707 505 PANTHER OS05G0567200 PROTEIN 26 482 - -
Ahy18g0707 505 MobiDBLite consensus disorder prediction 81 101 - -
Ahy18g0707 505 SUPERFAMILY WRKY DNA-binding domain 233 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy18g0707 505 MobiDBLite consensus disorder prediction 186 211 - -
Ahy18g0707 505 Pfam WRKY DNA -binding domain 242 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g0707 505 Gene3D WRKY domain 225 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy18g0707 505 MobiDBLite consensus disorder prediction 175 234 - -
Ahy18g0707 505 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 26 482 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0707 Ahy-Chr18 7481845 7484123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0707 35 472 WRKY Transcription Factor Family AT1G62300 51.452 5.64e-131 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy18g0707 WRKY 2.90E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0707 - - aip:107613963 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0707 18 7481845 7484123 Ahy8g1499 8 31527429 31529640 hybridization
Ahy18g0707 18 7481845 7484123 Ahy13g1372 13 17012772 17016839 PCT
Ahy13g1372 13 17012772 17016839 Ahy18g0707 18 7481845 7484123 PCT