Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0692 ATGGACATGATGGGAACCGAACGTGTTTGTTATGTTTACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGTAGCAGTTTGCTGACCATAGTGACAGTTAGATGTGGGCATTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCTCTTCAAACATTGCCTCCTCAAGACCCTCACCATCATCAGAAGCAGCACCTGAGCTTCCAAGATCCAAGCAGCAAGGAACTGGGATCATCCTCATCAAGATGCAACAAGTTATCAGCAGCATTTGATCCTGTAGACCATGATCCCCAACCTAGGATCCCTCCCATTCGTCCTCCGGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGAATTAAGGCTAGCAATCCAGACATAAGCCACAGGGAAGCTTTCAGCACAGCAGCCAAAAATTGGGCTCATTTCCCTCACATTCACTTTGGATTAAAGCTGGATGGAAACAAACAAGCAAAGTTGGACCAAGGGGAAGGGACTCAAAAGTCTAATGGATTCTACTGA 555 0.4559 MDMMGTERVCYVYCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQTLPPQDPHHHQKQHLSFQDPSSKELGSSSSRCNKLSAAFDPVDHDPQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGTQKSNGFY* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0692 184 MobiDBLite consensus disorder prediction 55 116 - -
Ahy18g0692 184 SUPERFAMILY HMG-box 106 154 IPR036910 -
Ahy18g0692 184 MobiDBLite consensus disorder prediction 72 89 - -
Ahy18g0692 184 PANTHER AXIAL REGULATOR YABBY 2-RELATED 1 184 - -
Ahy18g0692 184 Gene3D High mobility group box domain 106 173 IPR036910 -
Ahy18g0692 184 Pfam YABBY protein 6 161 IPR006780 GO:0007275
Ahy18g0692 184 PANTHER PROTEIN YABBY 6-RELATED 1 184 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0692 Ahy-Chr18 7229907 7237782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0692 4 184 C2C2-YABBY Transcription Factor Family AT1G08465 66.129 2.05e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Ahy18g0692 YABBY 6.30E-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0692 K25796 - gmx:100785458 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0692 18 7229907 7237782 Ahy8g1488 8 31319458 31327376 hybridization
Ahy18g0692 18 7229907 7237782 Ahy13g1353 13 16682459 16692205 PCT
Ahy13g1353 13 16682459 16692205 Ahy18g0692 18 7229907 7237782 PCT