Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0658 ATGTTTCTCAGCAATAATTTTTGTAGCTGGAGAGAGGTACCAATGGGGTCTCGCTTGGATCAGTACGAGATCATGGAGCAGATCGGCAGAGGAGCATTTGGAGCTGCAATTCTCGTTCATCACAAAACAGAGAAGAAAAAATATGTGTTGAAGAAAATAAGGCTTGCGAGGCAGACTGAAAGGTGCAGAAGAGCTGCACATCAAGAGATGGTTCTTATTGCTCGAATTCGGCACCCGTACATTGTGGAATTCAAAGAGGCTTGGGTTGAGAAGGGTTGCTTTGTCTGCATTGTTACTGGATACTGTGAAGGTGGAGACATGGCTGCATTGATGAAAAAATCAAACGGGGTATACTTTCCAGAGGAGAAACTCTGCAAGTGGTTTGCACAATTACTCTTAGCGGTGGAATATCTGCATTCCAATTATGTATTACATCGTGACTTAAAGTGTTCAAACATTTTTCTTACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGGCTTGCCAAGACACTAAAAGCAGATGATTTGGCATCTTCGGTGGTAGGAACTCCCAACTACATGTGTCCTGAACTGCTTGCAGATATTCCTTACGGATTCAAATCTGATATTTGGTCATTAGGGTGTTGTATATATGAAATGGCTGCTCATCGCCCTGCATTTAAAGCTTTTGATATGGCAGGATTGATAAGTAAGGTGAATCGTACCGCAATCGGCCCATTGCCTTCCTGTTATTCCCCATCCTTGAAAATGCTAATAAAGTGCATGCTGCGAAAAAATCCCGAGCATCGTTTATCAGCATCTGAGATCTTAAAACACCCCTATCTGCAACCTTATGTTGATCAATATCGTCCGTCTTTTTGTCCGCCTACAACCTGTTCTCCTCAAAAGTCTATTGGAGTTTTCCAGGATCCTCGAAGAAATAGGCCTGAAAGCCAAAACAATAATAGCTCAAGCAGTGACAAAGATTGTTTGATGTCAAATGAGAGAAACATGGAAATGGCAGAGCCAAGTTTTGGTAGAGAAACCACAATTCAGGCATTAGTTGTTGATGATGGCTCTGAGTATCCCCTGCCTAGTGAAGAAGGAAATTGTTCCAGCAATGTTAAAACAGTAAAGGTGGTGAAGCCATCTCATAATGAAAACCATCCTAATATTGCATCTAAGGAACAAAACCTTTTCAAGAATACAATGATTGCTTTAAAAGACAGAAGAGTTAGAGAATCAAGTTCTCCAATGAGAGGCAATCACATAAAGGCTGGCAATGTATCCATCCAAAAAATAAATACAGAGATACCTTCCAAATTGCCCAAACCTAGTTTTGGTTTGAGGCCTAATTTAGAGGCACCAACTATTGCACCTGCAAAAGCAACCTTTGATTCTGCAAAGGGATCACATAGTTTAAAGTATCAGTTACCGATGACAGAATCATTGCCGAAAACCAGACCTCGAGATATTGTGACTCTGCCATCCGGCCGAACCAAACAAATAGTTGGAAATGGAGTTCCTGCCAAGCCAAGGCAAATGACTCCTCCAAGATTACTCAGACCACCTTCATCTCCAGTTCGTATGAGGCAGGCCAGGCTTGATTTTCCAAACATAGTGAATGATATAAGAAACTCGAATCCAGTGGTTCATGAGCCTAAGATGAGCCATCATAGGTTGACTAACAGTCATATACCACGTGTTTCGAGAGATATTAGGAAAGAGCCTCGGAAGTATTCTGAACAGTGCTCAAAAGGAATGCAAACAGACAGCAGCAATTCAGTCTCATCTTCAGTGTCTATTCAAGGATTTGAACTTTGTGATGATGCAACTACTTTTATGGACTTGAGTGAACTCACACTTGCTGATCATGAGAATATAAACCACATTGAGAATGTGGAATCACATCTAAATAGCAACTTGCCTCATACGCATTCTGAGACATCTGAAGATGTGTCTTGGGAATCTGCAAGGCTTCCACGGAGCTTCCATAATAGCAATACAAGCAATGAGAACCTAAGTTCCACTTTATCTCAGGATCACTCAGTTCAAGATCATAAGGGAATTTTCGCTTCTGATGATGGTTGTCCCATAAATCGGACAACCATATCTGCTGCCTCAGGTTGTGGTAGAAAATCTCTACAGCCCTCTGCTTCAGCTGCAAAAGAATCCAAAGAGCTTCAAGACATTTCTGTGGAAACTACTTCAGCTAAGTCTCTGAAGCATCCAATTCCCATTTCTGAAGAGAAGTCTTCTTGTGAAGAAAGCACACCGGATAATAGGCCTGATAAAGATAGCCAACCAAAACTTATGATCACCCCAAGTGGTGATGAAGAATCCAAGGTAACCAAAAGATTGTCATCAGTGGCTGAAACAGATCCTCTGATAGTCTCCACTAAAATTCCAAGCCAGAACATTTTGCAAGAAGAGAAAGGAGCAGTTTTACAGAACACATCAGCTGAAATTTCATCTGCTGATCAACTTCCTCCAGCTTATGGTGATGTCATCCATGTTATACGGCATAGTAGTTATCGTGTCGGGAGTGAGCAGCCGGTGAAGGAATCTGTAGAAGTGGGAGTTCAAAATGTTGATGTTGGCAAGTTCATCAGCATTGTAAGGGATGATGCAGAAATGAGAAATGTAAGCACTCCTTTGGCCCTTAATTCTTCAAATTCTTCTGATCATTTAGAATCTCCAAGTTGCCCTGGCACGTTGAGTTTGGAATCAAGTACTCTTGACCAACCTACCATTAAGGATCAAGATTTGAAAATCCCTGATTCTACAGTATCAAAATCTGATTCCACTAAATATGAGACTAGTACAGTCAAAGAGGAAACACAGGCAAAGGAAATTTTGGATGTGAAATCTTCAAGACAGAGAGCTGAGGCACTTGAAGGTCTCTTAGAACTTTCTGCAGACTTGCTGGAGCAGAACAAATTGGAGGAGCTTTCAATTGTTTTGAAGCCATTTGGAAAAGATAAGGTATCCCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTAAAAGGATTAATGATTGAGGATAGTGTGGGAAGAGCTTCATGA 3051 0.4146 MFLSNNFCSWREVPMGSRLDQYEIMEQIGRGAFGAAILVHHKTEKKKYVLKKIRLARQTERCRRAAHQEMVLIARIRHPYIVEFKEAWVEKGCFVCIVTGYCEGGDMAALMKKSNGVYFPEEKLCKWFAQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKVNRTAIGPLPSCYSPSLKMLIKCMLRKNPEHRLSASEILKHPYLQPYVDQYRPSFCPPTTCSPQKSIGVFQDPRRNRPESQNNNSSSSDKDCLMSNERNMEMAEPSFGRETTIQALVVDDGSEYPLPSEEGNCSSNVKTVKVVKPSHNENHPNIASKEQNLFKNTMIALKDRRVRESSSPMRGNHIKAGNVSIQKINTEIPSKLPKPSFGLRPNLEAPTIAPAKATFDSAKGSHSLKYQLPMTESLPKTRPRDIVTLPSGRTKQIVGNGVPAKPRQMTPPRLLRPPSSPVRMRQARLDFPNIVNDIRNSNPVVHEPKMSHHRLTNSHIPRVSRDIRKEPRKYSEQCSKGMQTDSSNSVSSSVSIQGFELCDDATTFMDLSELTLADHENINHIENVESHLNSNLPHTHSETSEDVSWESARLPRSFHNSNTSNENLSSTLSQDHSVQDHKGIFASDDGCPINRTTISAASGCGRKSLQPSASAAKESKELQDISVETTSAKSLKHPIPISEEKSSCEESTPDNRPDKDSQPKLMITPSGDEESKVTKRLSSVAETDPLIVSTKIPSQNILQEEKGAVLQNTSAEISSADQLPPAYGDVIHVIRHSSYRVGSEQPVKESVEVGVQNVDVGKFISIVRDDAEMRNVSTPLALNSSNSSDHLESPSCPGTLSLESSTLDQPTIKDQDLKIPDSTVSKSDSTKYETSTVKEETQAKEILDVKSSRQRAEALEGLLELSADLLEQNKLEELSIVLKPFGKDKVSPRETAIWLAKSLKGLMIEDSVGRAS* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0658 1016 MobiDBLite consensus disorder prediction 703 736 - -
Ahy18g0658 1016 MobiDBLite consensus disorder prediction 738 761 - -
Ahy18g0658 1016 Gene3D Phosphorylase Kinase; domain 1 8 101 - -
Ahy18g0658 1016 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 15 999 - -
Ahy18g0658 1016 MobiDBLite consensus disorder prediction 633 676 - -
Ahy18g0658 1016 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0658 1016 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 15 999 - -
Ahy18g0658 1016 MobiDBLite consensus disorder prediction 703 783 - -
Ahy18g0658 1016 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0658 1016 MobiDBLite consensus disorder prediction 880 914 - -
Ahy18g0658 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Ahy18g0658 1016 SUPERFAMILY Protein kinase-like (PK-like) 19 324 IPR011009 -
Ahy18g0658 1016 CDD STKc_Nek 21 276 - -
Ahy18g0658 1016 MobiDBLite consensus disorder prediction 650 676 - -
Ahy18g0658 1016 MobiDBLite consensus disorder prediction 494 522 - -
Ahy18g0658 1016 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Ahy18g0658 1016 MobiDBLite consensus disorder prediction 298 324 - -
Ahy18g0658 1016 Gene3D Transferase(Phosphotransferase) domain 1 104 349 - -
Ahy18g0658 1016 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0658 Ahy-Chr18 6760394 6766646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0658 26 287 MAP Kinase Kinase Kinase AT3G06030 32.847 6.15e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Ahy18g0658 Pkinase 7.50E-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0658 K08857 - gmx:100780141 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0658 18 6760394 6766646 Ahy18g0658 18 6760394 6766646 ECH
Ahy18g0658 18 6760394 6766646 Ahy8g1461 8 30962343 30968666 hybridization
Ahy18g0658 18 6760394 6766646 Ahy13g1324 13 15817930 15824932 PCT
Ahy13g1324 13 15817930 15824932 Ahy18g0658 18 6760394 6766646 PCT