Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0648 ATGGTGGACAGGGATTCAAGCGAAGCACACATGTCAATAGCAGCTTCTTCGATATTCCCTGGCTTTAGGTTCTGTCCCACTGACGAGGAGTTGATCTCTTATTACCTCAGGAAAAAGCTGGACGGTGATGAGGACAGTGTTCAGGTCATTTCGGAGCTTGAGCTTTGCACATTTGAGCCTTGGGATTTGCCAGGAAAATCCTTCATTCAATCTGACAACGAGTGGTTTTTCTTCTCGCCACGGGGGAGAAAGTATCCCAATGGTTCACAGAGTAAAAGGGCAACTGAATGTGGATATTGGAAGGCCACAGGGAAAGAACGCGTTGTAAAGTCTGGTCAGAATGTTATTGGTACCAAACGCACTTTGGTATTCCATCTCGGTCGAGCTCCTAAAGGCGAAAGAACTGAATGGATTATGCATGAGTACTGCGTCAATGACAAATCTCAGGATTCATTGGTAATTTGTCGGCTCAAGAGGAATACAGAATTCCGTGCAAGTGATCATTCTAACAGAACTTCACACGATAGTGATTGTGGAGTCTCAGAAGGAGTTACAGTTCAAGGGGACACTTATGTGCCTATTCAAGATAAAGAGACTGGATGCAGCTCCAAGAGGACTAGCAGTAGTAATAGTTCTCCATCTACTACTGGCCAAATTGAATCCAGTCATAGAGTTGCCAATGAAGGCAATGAAGCCAATCAAGCAAATGAAGCCAATGTAGCCAATGAAATCAATCAAGTCAATGAAGCCATTGAAGCTAATGTAGCCAATATAGCCAAGGAAGCCAATCAAGCCAATGAAGTCAGTGTAGCCAATGAAGTTAATATAGCCAATGAAACCAATGAAGCCAATGTAGCCAATGAAGTCAATATAACCAATGAAGCCAATCAAGTCAATCAAGCCAATGAAGTTAATATAGCCAATGAAGCCAATCAAGTCAATCAAGCCAATGAAGCCAATGTAGCCAATCCCAGAAATCACCCTCAGGTGAATGAAGAAGAGGATTGTTATGCAGAGATCCTAAATGATGATATCATCAAGTTAGATGAATCAACACTCTCACGGCCATCGCCACCACAAGGGACAGCAAACAGGAGAATCAGGCTAAGGGTTCCCAAATCAACAGTTCCCAAATCAAGGGTTCCCAAATCAAGGGTTCCAACGGGAAATGGTTGTCAATGTTCCAAGCAATCATCAAACAAAATTAACACCTTCCTGTCATACCCTTTGGTGGTCTTCACTTTCTTCGTTTTCACTTTGTTAGCTCTAGGCTTCTTTTTTATTAGGAGGTCCCAAACTACTGCCCAATATTCTCAAGACCTCTCTAGAGTTTAA 1335 0.427 MVDRDSSEAHMSIAASSIFPGFRFCPTDEELISYYLRKKLDGDEDSVQVISELELCTFEPWDLPGKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERVVKSGQNVIGTKRTLVFHLGRAPKGERTEWIMHEYCVNDKSQDSLVICRLKRNTEFRASDHSNRTSHDSDCGVSEGVTVQGDTYVPIQDKETGCSSKRTSSSNSSPSTTGQIESSHRVANEGNEANQANEANVANEINQVNEAIEANVANIAKEANQANEVSVANEVNIANETNEANVANEVNITNEANQVNQANEVNIANEANQVNQANEANVANPRNHPQVNEEEDCYAEILNDDIIKLDESTLSRPSPPQGTANRRIRLRVPKSTVPKSRVPKSRVPTGNGCQCSKQSSNKINTFLSYPLVVFTFFVFTLLALGFFFIRRSQTTAQYSQDLSRV* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0648 444 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Ahy18g0648 444 Coils Coil 241 268 - -
Ahy18g0648 444 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Ahy18g0648 444 MobiDBLite consensus disorder prediction 189 223 - -
Ahy18g0648 444 Gene3D NAC domain 27 164 IPR036093 GO:0003677|GO:0006355
Ahy18g0648 444 MobiDBLite consensus disorder prediction 196 223 - -
Ahy18g0648 444 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Ahy18g0648 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 260 427 - -
Ahy18g0648 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 238 - -
Ahy18g0648 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 260 427 - -
Ahy18g0648 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0648 Ahy-Chr18 6622036 6624243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0648 6 192 NAC Transcription Factor Family AT2G27300 65.775 2.15e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy18g0648 NAM 6.10E-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0648 - - ahf:112706937 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0648 18 6622036 6624243 Ahy18g0648 18 6622036 6624243 ECH
Ahy18g0648 18 6622036 6624243 Ahy8g1451 8 30826870 30829073 hybridization