Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0637 ATGGAGGATCCACCAACTGGTTTTCGGTTCTATCCTACAGAAGAAGAGCTAGTTGCTTTCTACCTAAACACCCAGCTTCAACTACAAGGCCACGCCAATAACATCAACAGGGTCATTCCAGTGGTTGACATCAATGGCGTTGAGCCCTGGACTCTTCCATCACTGGCGGGAGAGCTGTGCAGGGAAGAGAAGGAACAATGGTTCTTCTTTGTGCCTCGCCAAGAGAGGGAAGCCAGAGGGGGGAGGATCAACAGAACCACTGCTTCTGGTTACTGGAAAGCCACCGGATCACCGGGGTACGTATACTCTTCCGATAACCAAGTGATCGGAGTCAAGAAAACCATGGTTTTCTACAAAGGAAAAGCTCCCACCGGTCGCAAAACTAAATGGAAGATGCATGAATACCGCGCCATCGTTCAAGCCCCTAACCAATCTCCCACGGCTATTCCTCAGTTGAGGCACGAATTCAGCTTGTGTCGCGTGTACGTGATATCCGGAAGTTTCAGAGCATTTGATCGACGGCCACGGGAGGTGGTGGTGCCAAGAGTTCTTCATCATGGTTCTTCTACAACAAGTGCTCAGCAGCATCAAGGAGAATCATCAGCAAGGGTGCAGGCTAATAATAATAATAACGGGTCGAGCTCGTCGGAAACTTCCCTTTCATCAGGTGGTCCTGATTTGCCACCAGATACTGGAGGAGGAGGGTCAAGTAGCAATTGGAATAGTAGTGAGGTTCAAGTTCAAGCTCAAGTTCAAGAACCGCTATGGGAATGGGAACAACTCGATTGGCTATAA 795 0.4918 MEDPPTGFRFYPTEEELVAFYLNTQLQLQGHANNINRVIPVVDINGVEPWTLPSLAGELCREEKEQWFFFVPRQEREARGGRINRTTASGYWKATGSPGYVYSSDNQVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIVQAPNQSPTAIPQLRHEFSLCRVYVISGSFRAFDRRPREVVVPRVLHHGSSTTSAQQHQGESSARVQANNNNNGSSSSETSLSSGGPDLPPDTGGGGSSSNWNSSEVQVQAQVQEPLWEWEQLDWL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0637 264 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Ahy18g0637 264 MobiDBLite consensus disorder prediction 232 250 - -
Ahy18g0637 264 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 263 - -
Ahy18g0637 264 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Ahy18g0637 264 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Ahy18g0637 264 SUPERFAMILY NAC domain 4 162 IPR036093 GO:0003677|GO:0006355
Ahy18g0637 264 MobiDBLite consensus disorder prediction 185 225 - -
Ahy18g0637 264 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 263 - -
Ahy18g0637 264 MobiDBLite consensus disorder prediction 185 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0637 Ahy-Chr18 6544921 6546438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0637 7 263 NAC Transcription Factor Family AT5G22380 54.651 5.18e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy18g0637 NAM 4.40E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0637 - - gmx:100780264 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0637 18 6544921 6546438 Ahy18g0637 18 6544921 6546438 ECH
Ahy18g0637 18 6544921 6546438 Ahy8g1440 8 30759098 30760550 hybridization