Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0634 ATGCTCCAGCCTAAGATCCCCAACAACCGTCGCAAAATGACTCGCCAAGGAGCTTATAAAGAAAGCGATGACATGCTCATTGATGAACCAAAACTGCCTCAGCAAGGCCAAATCGCGGCCCTTCCTAATGAGTTCAACCCCAGTTATCTGAAAATATATTACAGTAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGGAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCACCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAACCCTGCACATAGGAATGCTTATGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGACTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGTCTAATGAGCAGAGAGCAGCAGTTGCGGACTATTTTCGTGTCTACAAGGGAAATGAAAATAACTATAAGAAGGTTTCCTTGATGGGTCAAGTTCTGCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAGGAATATTTTGAGACAAAACTGCTTACAAGTCAAAATTTACTTTCTAGCGAGGAGAGATATGAAAAGATCCTAGAGATGATTCCTGATCAATCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATTAATATTGTTCGATGGGAGCAGCTTAAACAGTTGCTGCAAAAACATAAGGCACAAGGGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATATCCTAGGCTTGATATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAACAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACGACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGGTTTGTTTGATACTCTGACAATACTTAGGTTTCTTTCTGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTTCAGCCATTACTGAAAATTTGCAAGGAGGAAATGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGAATCTCCTTAGTTGGTAG 1437 0.4196 MLQPKIPNNRRKMTRQGAYKESDDMLIDEPKLPQQGQIAALPNEFNPSYLKIYYSKLFPHADLYRWMSYGNDGKHPACDSSYLGRREFSYTLDNDIFVRYNTFNSATELENSIKDKCPLKIDIGPIYNLNPAHRNAYAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMTVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLSNEQRAAVADYFRVYKGNENNYKKVSLMGQVLHPFLARSYTEVLKEYFETKLLTSQNLLSSEERYEKILEMIPDQSIASELRGKWQESRRSSSAKEDINIVRWEQLKQLLQKHKAQGVRRCVEEIVFTYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGGLFDTLTILRFLSEWNKTSLANAIKLFRSSFLQPLLKICKEEMESSYNAKLQQSKNLLSW* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0634 478 Gene3D DNA primase, PRIM domain 35 459 - -
Ahy18g0634 478 CDD AE_Prim_S 59 394 IPR014052 GO:0003896|GO:0006269
Ahy18g0634 478 PANTHER DNA PRIMASE 56 478 - -
Ahy18g0634 478 MobiDBLite consensus disorder prediction 1 20 - -
Ahy18g0634 478 PANTHER DNA PRIMASE SMALL SUBUNIT 56 478 IPR014052 GO:0003896|GO:0006269
Ahy18g0634 478 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 51 406 IPR014052 GO:0003896|GO:0006269
Ahy18g0634 478 SUPERFAMILY Prim-pol domain 45 408 - -
Ahy18g0634 478 Pfam DNA primase small subunit 152 385 IPR002755 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0634 Ahy-Chr18 6470475 6483470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0634 13 478 Core DNA Replication Machinery Family AT5G41880 61.064 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0634 K02684 - tcc:18606689 713.761