Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0624 ATGTATCATCATCAAGGGAAGAACATGCACTCTTCTTCAAGAATGCCAATCCCCTCTGAGAGGCACATGTTCCTTCAAACAGGAAACGGGTCTGGTGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCACGATTGAAATGGACGCCGGATCTTCATGCCAGGTTCATAGAAGCAGTGAACCAGTTAGGTGGAGCTGACAAGGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGTCTTACTTTATATCATCTGAAGAGCCATCTGCAGAAGTACAGATTGAGCAAGAATTTGCATGGACAAACTAACACTGTAACACACAAAATCACAACAAATGCGGGGGCAACAACAAGTGAAAGATCACTTTCAGAACCCAGTGGAACTCATATGAACAAGTTAAGCCTTGGCCCACAGGCTAACAACAGAGATTTACATATAAGTGAGGCACTGCAGATGCAAATTGAAGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTCGGATAGAGGCACAAGGAAAATACCTGCAGTCTGTGCTAGAGAAAGCTCAAGAGACACTTGGTAGACAAAATTTGGGAATGGTAGGACTTGAAGCTGCCAAAGTTCAACTATCAGAGCTGGTGTCCAAGGTCTCCTCCCAGTGCTTGAACTCGGCATTTTCAGAGCTGAAGGAACTACAAGGATTTTGCCCCCAGCAACCACAAACCAACCAGCCAAATGATTGCTCAATAGATAGTTGCCTCACATCTTGTGAAGGGTCACAGAAGGAGCAAGAGATACAGAATGGTGGGATAGGTTTAAGGCACTTGAATGGCCATGGCCATGCATTCATGGAAAGAAAGGGAGGCACAGAAGCTCCTAAATGGAGTAATGAAGTGAAAAACAACACATTTCTAGCTCCATTAGGCAAGAATTCAGAAAGAAGTAGCTATGGTGCAGAGAGAAGCAGTGGAAACTTGTCTATGAGCATTGGACTTGAAAGGGAAACTGAGAATGGAAGCAGCATGTATACTGAGAGTCACACTCACACAGATGGTGAGTTCTGGCACAGAAACAGCAATAGGACAGAACCAAAGAATGAAGCAATGGATGGAGGAAGAGGTTCCCATGATTATAGGTTGCCTCCTCCATACTTTTCAGCAGCAAGATTGGACTTAAACTCACATGGAGATAACAATGAAGCTGCAACAACAACAACAAGCTGTAAACAACTGGATTTGAACAGATTCAGTTGGAGCTGA 1266 0.4392 MYHHQGKNMHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQTNTVTHKITTNAGATTSERSLSEPSGTHMNKLSLGPQANNRDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGMVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQPQTNQPNDCSIDSCLTSCEGSQKEQEIQNGGIGLRHLNGHGHAFMERKGGTEAPKWSNEVKNNTFLAPLGKNSERSSYGAERSSGNLSMSIGLERETENGSSMYTESHTHTDGEFWHRNSNRTEPKNEAMDGGRGSHDYRLPPPYFSAARLDLNSHGDNNEAATTTTSCKQLDLNRFSWS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0624 421 PANTHER MYB-RELATED PROTEIN 2 2 421 - -
Ahy18g0624 421 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 421 IPR044848 GO:0003700
Ahy18g0624 421 MobiDBLite consensus disorder prediction 344 379 - -
Ahy18g0624 421 Coils Coil 150 170 - -
Ahy18g0624 421 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Ahy18g0624 421 Gene3D - 42 100 - -
Ahy18g0624 421 MobiDBLite consensus disorder prediction 351 376 - -
Ahy18g0624 421 Pfam Myb-like DNA-binding domain 45 96 IPR001005 -
Ahy18g0624 421 MobiDBLite consensus disorder prediction 115 141 - -
Ahy18g0624 421 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Ahy18g0624 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Ahy18g0624 421 Pfam MYB-CC type transfactor, LHEQLE motif 148 194 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0624 Ahy-Chr18 6365465 6368905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0624 75 421 G2-like Transcription Factor Family AT3G04030 50.423 3.41e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy18g0624 Myb_DNA-binding 3.70E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0624 - - gmx:100810396 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0624 18 6365465 6368905 Ahy8g1427 8 30588773 30591694 hybridization