Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0622 ATGGGGAGCCAGAGAATAATAGGAGGAGGACTTGGTTTATCTGAGGCAGGGCCTTCAACTCACCACCATCACCATGTCCCTTCTTATGGTGTTCTTCATGGAATTAATTCTGCTAATCCATCAACCTTAATTAATGAAGGACATGCTTTTAACTTTGGAGAGTTGGAAGAGGCAATAGTGCTGCAAGGAGTAAAGGCAAGAAATGATGAAGGCAAAGCACCTTTATTCACAACAGCACCCAGACCTGCAGCTACACTAGAAATGTTCCCTTCATGGCCAATCAGATTTCACCAAACCTCAAGGGGAGGTTCAAAATCAGGAGGAGAAAGCACTGATTCAGCACTTTCAACAAAAACTGAGCCACCCTTGGAAGCAGAATCTCCAATGAGTAAAAAGGCAACAACACCTTCTTCTTTAGATCATCAGCACCACCTTCAACATGATCATCATGATGCCTCAAGAATAGTAGGCCCTTCTTCATCATCACAGAATCAATCACAAGCCAAATCACCTCATGAAAAGACATTGAGACGTTTGGCTCAAAACAGAGAGGCAGCAAGAAAAAGCCGTCTAAGGAAAAAGGCTTATGTGCAGCAATTAGAGTCAAGTAGATTAAAGCTTACACAACTTGAACAAGACCTTCAAAGGGCTCGTTCTCAGGGACTATTCATGGATTGTGGTGGTGTTGGAGGCAATCTAAGCTCTGGAGGTGCGATGTTTGACATGGAATACGGAAGGTGGTTGGAGGAAGAGCAGCGGCTGATGGGGGAGCTCCGGAACGGGGTGCAGGCGGCGGTGTCGGAGGGGGAAATGAGAGGGATAGTGGATGGATATTTGTCACATTACGATGAGCTGTTCAGGCTGAAGAGTGTCGCAGCTAAATCAGATGTTTTCCATCTCATCAATGGCATGTGGACCTCCCAAGCTGAACGCTGCTTCCTCTGGATCGGTGGTTTCAAGCCCTCCGACCTCATCACGATGTTGATACAACAGTTGGAGCCACTGGCGGAGCAACAGATAATGGGAATGTATGGCCTGCGCCATTCCTCACAGCAAGCGGAGGACGCTCTCTCTCAAGGCCTTGACCAGCTCCAGCAGTCTCTCGTCGACACCATCGCCGGCGGCCCCATTGTCGACGGCGTCCAACAGATGGTTGTTGCCATGGGCAAGCTTGCCAATCTTGAAGGCTTTGTTCGCCAGGCTGATAATTTGAGACAGCAAACACTTCATCAATTATGTCGATTACTAACAGTTCGTCAAGCAGCACGGTGTTTTATTGTCATTGGAGAATATTATGGACGCCTTCGCGCCCTTAGTTCTCTTTGGGCATCAAGGCCACGAGAGACGTTGATGAGCGATGATAACTCATGCCAAACAACCACTGACTTGCAAATGGTGCATCCTTCTCATCATCAGAATCACTTCCCCAGCTTCTAA 1437 0.476 MGSQRIIGGGLGLSEAGPSTHHHHHVPSYGVLHGINSANPSTLINEGHAFNFGELEEAIVLQGVKARNDEGKAPLFTTAPRPAATLEMFPSWPIRFHQTSRGGSKSGGESTDSALSTKTEPPLEAESPMSKKATTPSSLDHQHHLQHDHHDASRIVGPSSSSQNQSQAKSPHEKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGLFMDCGGVGGNLSSGGAMFDMEYGRWLEEEQRLMGELRNGVQAAVSEGEMRGIVDGYLSHYDELFRLKSVAAKSDVFHLINGMWTSQAERCFLWIGGFKPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEDALSQGLDQLQQSLVDTIAGGPIVDGVQQMVVAMGKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRETLMSDDNSCQTTTDLQMVHPSHHQNHFPSF* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0622 478 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 177 192 IPR004827 GO:0003700|GO:0006355
Ahy18g0622 478 PANTHER TRANSCRIPTION FACTOR TGA9 73 455 - -
Ahy18g0622 478 Gene3D - 173 222 - -
Ahy18g0622 478 PANTHER TRANSCRIPTION FACTOR TGA9 73 455 - -
Ahy18g0622 478 ProSiteProfiles DOG1 domain profile. 237 445 IPR025422 GO:0006351|GO:0043565
Ahy18g0622 478 Coils Coil 193 220 - -
Ahy18g0622 478 MobiDBLite consensus disorder prediction 137 154 - -
Ahy18g0622 478 MobiDBLite consensus disorder prediction 88 176 - -
Ahy18g0622 478 Pfam bZIP transcription factor 174 215 IPR004827 GO:0003700|GO:0006355
Ahy18g0622 478 Pfam Seed dormancy control 255 329 IPR025422 GO:0006351|GO:0043565
Ahy18g0622 478 SMART brlzneu 170 235 IPR004827 GO:0003700|GO:0006355
Ahy18g0622 478 CDD bZIP_HBP1b-like 174 224 - -
Ahy18g0622 478 MobiDBLite consensus disorder prediction 97 120 - -
Ahy18g0622 478 MobiDBLite consensus disorder prediction 1 27 - -
Ahy18g0622 478 SUPERFAMILY Leucine zipper domain 174 217 IPR046347 GO:0003700|GO:0006355
Ahy18g0622 478 MobiDBLite consensus disorder prediction 155 170 - -
Ahy18g0622 478 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 216 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0622 Ahy-Chr18 6346617 6353663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0622 153 478 bZIP Transcription Factor Family AT1G08320 69.486 1.18e-171 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy18g0622 DOG1 2.20E-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0622 K14431 - gmx:100775461 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0622 18 6346617 6353663 Ahy18g0622 18 6346617 6353663 ECH
Ahy18g0622 18 6346617 6353663 Ahy8g1426 8 30570245 30577462 hybridization
Ahy18g0622 18 6346617 6353663 Ahy3g0025 3 245432 249114 PCT
Ahy3g0025 3 245432 249114 Ahy18g0622 18 6346617 6353663 PCT