Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0621 ATGCAACAAACAACAATGGCAGTTTCTGGAACAAAAACCATTTCTCATGAAACCCTTACACAAGAATTGTTACAATCAGAAGCAGCAGAACCAGTGAGCAAGCAGAACTCAATCCTCTCACTCACACTTGATGAGATCCAATGCAAGAGTGGTAAGAGCTTTGGATCCATGAGCATGGATGAATTCTTAGCCAGCATTTGGAGCTCTGAGGACAACAACAACAACAACAACAACAACACAAATCAAACCCTTCATGATGAACAAGCTTCTCAACACATCATGAAAAGTGCTGGAACAAAAACAGAACAACAACAACAAGGTTCATTCTGTGTCATCCCATCTCCAATTTGCAAGAAAACTGTGGAGGAAGTTTGGTCTGAGATCCACAAAGACCAAGAACCACAACAAAGGGATGAATCTAACAACATTGGAATGAATGAGGCACTTAGAAAGCAACAAACACTTGGGGAAATGACATTGGAGGATTTTCTAATTAAAGCTGGTGTTGTACAAGAATCAAAATTAACATCAAAATCAAGAGTTGCTACTACAACAATAATGCCTTTAGTATTTCAGAATCATGTTAGCAACATTGCAAGTAGTAATAGACCAATGGATCCAAGTTATGCAGTGAGGTCTCCTATGGGAGTAGGATTCCCTAGCCAACAAAATCTTGGGAACCATGGGACTAATAACAATGGACTTGGAACATATCCAATTTTGTTACAGAATAATAATAGCTCCACAAGGCTTCTGGACTCGAGCGTGGGCAGCAGCAGGAAGAGGGTAATTGATGGTCCTCCAGAAGTGGTGGTAGAGCGAAGGCAGCGCAGAATGTTGAAGAATCGAGAATCTGCTGCAAGATCACGGGCGAGAAGACAGGCATATACGGTTGAGCTAGAAGCAGAGCTGAATGTGCTAAAGGAAGAGAATGAGAATCTAAAACAAATTCTGGATGAAGCAGAGCTCAAGAGGAAACAAGAGATTTCACAGAGGAAGCACACAACAAAGGCACAAAAGAGGACAGAAAAATTGAGGGAAATAAGAAGGACTATTAGTGCAGCTTGGTGA 1071 0.4118 MQQTTMAVSGTKTISHETLTQELLQSEAAEPVSKQNSILSLTLDEIQCKSGKSFGSMSMDEFLASIWSSEDNNNNNNNNTNQTLHDEQASQHIMKSAGTKTEQQQQGSFCVIPSPICKKTVEEVWSEIHKDQEPQQRDESNNIGMNEALRKQQTLGEMTLEDFLIKAGVVQESKLTSKSRVATTTIMPLVFQNHVSNIASSNRPMDPSYAVRSPMGVGFPSQQNLGNHGTNNNGLGTYPILLQNNNSSTRLLDSSVGSSRKRVIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNVLKEENENLKQILDEAELKRKQEISQRKHTTKAQKRTEKLREIRRTISAAW* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0621 356 Coils Coil 297 331 - -
Ahy18g0621 356 SMART brlzneu 270 334 IPR004827 GO:0003700|GO:0006355
Ahy18g0621 356 PANTHER BZIP TRANSCRIPTION FACTOR 29 356 - -
Ahy18g0621 356 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 272 320 IPR004827 GO:0003700|GO:0006355
Ahy18g0621 356 SUPERFAMILY Leucine zipper domain 274 320 IPR046347 GO:0003700|GO:0006355
Ahy18g0621 356 Pfam bZIP transcription factor 274 322 IPR004827 GO:0003700|GO:0006355
Ahy18g0621 356 Gene3D - 272 328 - -
Ahy18g0621 356 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 277 292 IPR004827 GO:0003700|GO:0006355
Ahy18g0621 356 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 356 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0621 Ahy-Chr18 6340048 6342424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0621 16 356 bZIP Transcription Factor Family AT3G44460 46.067 6.88e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy18g0621 bZIP_1 8.00E-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0621 K14432 - gmx:100799576 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0621 18 6340048 6342424 Ahy18g0621 18 6340048 6342424 ECH
Ahy16g1867 16 97306709 97311183 Ahy18g0621 18 6340048 6342424 ECH
Ahy12g2948 12 119093700 119096732 Ahy18g0621 18 6340048 6342424 ECH
Ahy18g0621 18 6340048 6342424 Ahy8g1425 8 30563767 30566162 hybridization