Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0591 ATGGAGTTTGAGAATAACGAAGAATCACTGTATTACTATTCTTCTTCTTCATCACTATCTTCTTCTACTTCATCTCAAACCCAACGCTCGGCCATCAGCCCACCGCCATCGTCATCGTCGCCATCACGCAGTCAGAAGAGGAGATCGGGGAGGAAGAAGTTCCGAGAGATGAGACACCCGGTGTACAGGGGTGTCCGGCGGAGGAACGGCAACAAGTGGGTATGCGAAGTGAGAGAACCAATCAAGAAATCAAGAATATGGCTCGGAACTTACGCTACCCCTGAAATGGCCGCTAGGGCACACGACGCCGCAGTTCTGGCACTTAGAGGCACCTCAGCCACCTTCAATTTCCCTCTCTCCGTCCCCCTTCTTCCCCTTGCGGAGTCATCTTCACCTCAACATATTCGAGAAGCTGCTTCCAAAGCCGCACAACAAACTAGTAATAATGATATTACTAACCCTCCTGTTTCTTCTTCAAATATGAATCTTTGTGTTGGTGTTGATGATGGTGGTGGTAGTGGTGGAGTGGGGTCGATTTCATCGACGACGTTCTTTGATGAGGAGGCAATGTTTAACATGCCTGCATTGCTTGATAGCATGGCGGAGGGTTTGCTTATAACACCACCGTCCATGAAGCGAGGAGCTTTTCATGATGATGATGAATTTCAAACTGACCTCACTCTCTGGAATTTCGATTAA 699 0.4807 MEFENNEESLYYYSSSSSLSSSTSSQTQRSAISPPPSSSSPSRSQKRRSGRKKFREMRHPVYRGVRRRNGNKWVCEVREPIKKSRIWLGTYATPEMAARAHDAAVLALRGTSATFNFPLSVPLLPLAESSSPQHIREAASKAAQQTSNNDITNPPVSSSNMNLCVGVDDGGGSGGVGSISSTTFFDEEAMFNMPALLDSMAEGLLITPPSMKRGAFHDDDEFQTDLTLWNFD* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0591 232 MobiDBLite consensus disorder prediction 16 58 - -
Ahy18g0591 232 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Ahy18g0591 232 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 230 - -
Ahy18g0591 232 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Ahy18g0591 232 Gene3D AP2/ERF domain 61 120 IPR036955 GO:0003700|GO:0006355
Ahy18g0591 232 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Ahy18g0591 232 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Ahy18g0591 232 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 230 IPR045277 GO:0003700
Ahy18g0591 232 MobiDBLite consensus disorder prediction 16 44 - -
Ahy18g0591 232 SUPERFAMILY DNA-binding domain 61 120 IPR016177 GO:0003677
Ahy18g0591 232 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Ahy18g0591 232 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0591 Ahy-Chr18 5897199 5897897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0591 18 232 AP2-EREBP Transcription Factor Family AT5G51990 46.296 8.39e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy18g0591 AP2 1.50E-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0591 18 5897199 5897897 Ahy18g0591 18 5897199 5897897 ECH
Ahy18g0591 18 5897199 5897897 Ahy8g1401 8 30204757 30205437 hybridization