Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0569 ATGCCCTCTGTTAATTGCTCAAAAGTTTCACATGGCATCAAAGTACAAGAATTGGGGAAGCTTATCCCTTATGAGTTGACTGTGAATCCTGGACAGGATGTGGCGAAGGAGATATTGGAGGCATGGGGAGCAAGCAATCGGTTTGGTTGCATACTTTCTGCTTCTGGTAGTATAGCAAGAGCCGTATTTGGCAGACCAAACTCAAATGAAATTCGTATATATGAGGGGAGCTTTGAGATTCTGTCAATGTCTGGACTTTATATGCTGCGAGACGATGGTTCTGAAGCTTCGAGTTTGAGCATCACACTGGCTGCTTCTAATGGAACTGCTTTTGCTGGTACCCTCATCAACACCTTGATGGCCAATGACACTGTTCAACTTCTTATGGCGTACTCAGAGAAAGAAGAGGGAAAGAGCACCATGGAAGGCGAAGCTGCTCCAACAAATGCCACAGCATCATCAGAGAAGAACATAATTAAGCACTCTAACTCTGCAAGTGCAAATGATGATCCTTGCATAGAGTGTACTATGGATTATGAATTCTTTGATTCTGATGAACAATATGAGTCATGA 573 0.4311 MPSVNCSKVSHGIKVQELGKLIPYELTVNPGQDVAKEILEAWGASNRFGCILSASGSIARAVFGRPNSNEIRIYEGSFEILSMSGLYMLRDDGSEASSLSITLAASNGTAFAGTLINTLMANDTVQLLMAYSEKEEGKSTMEGEAAPTNATASSEKNIIKHSNSASANDDPCIECTMDYEFFDSDEQYES* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0569 190 Pfam Plants and Prokaryotes Conserved (PCC) domain 24 130 IPR005175 -
Ahy18g0569 190 Gene3D - 24 151 - -
Ahy18g0569 190 PANTHER DUF296 DOMAIN PROTEIN 19 153 - -
Ahy18g0569 190 ProSiteProfiles PPC domain profile profile. 18 154 IPR005175 -
Ahy18g0569 190 MobiDBLite consensus disorder prediction 144 170 - -
Ahy18g0569 190 CDD DUF296 23 127 IPR005175 -
Ahy18g0569 190 MobiDBLite consensus disorder prediction 136 171 - -
Ahy18g0569 190 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 19 153 IPR039605 GO:0003680
Ahy18g0569 190 SUPERFAMILY AF0104/ALDC/Ptd012-like 23 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0569 Ahy-Chr18 5568766 5572012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0569 24 130 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 40.541 3.28e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0569 - - ahf:112706866 333.954