Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0559 ATGGCTTTGAGATGGCCGCTCCTACTGCGGTTCCGTTCTCAACAACCTCTGCTCGCTCCAACTAACTTTGCCGCCTTCTCCGATCTCGCCGAACCGCGTGCTTTTGACGTGCCGTGTCTTCCTTCCGTGAATCTACTCCACCGGAGCAATGTTTTGGCTCCGGCACTGAAGCTGAAGGTTCTGGCGCCGTACGTCGTCAAATGCCTCGCCAGATCCACAGAGGAGAAGCAATGGAGCGACGCCGAAACAGTCGTCTCTGATTCCGACGAAGCTGCTTCTGAGGATGACGGAAACGGTCAGCTTCGGAGCCGAACCTCTGCTTCGGAAACTGACCGTCTTGAGTCTCCGAGAGTTGCGACTCCCTCCTCCGGCGACTCTCTTTCGCTTGGAATTCGAGAACCGGTTTACGAAGTTGTGGAAGTGAGATCAGATGGAACAGTATCGACAAGAAAAATCAATAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCGTCTTTGTTTTTGACGAATTCGGTACCCTCTTTGCTGGTTCGTGAGTATGCGATACTTCTAAATCTGGGCTCCCTTCGAGCAATAGCAATGAAAGATTGTGTACTTATATTTGACTATAATCGTAAAGGAGGGCAAGCTTTTCTGGAGTCATTGTTGCCCAGGTTGAACCCCAAGAACAGTAATGGAGGGCCATCAATGCCATTTGAACTCGAGGTGCAGGCTCTTCTTGAAGCCTTGCCAAATCGATTAACGGGTGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAGGGCTGGCGCTCTTAGGCAGATGCTGCTCGACCTTTTGGAAGATCCCCATGAAATACGCCGTATATGTATTATGGGAAGAAACTGCACGGTTACAAAAGGAGACAATTTGGTCGAATGCTCTGTACCCTTAGAGAAGCAGATTGCCGAAGAGGAGGAGGAGGAAATTGAGATGCTTCTTGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCAGTCAGTTTGAGCTCACGAAGGCTTGAGGTTAGCCGAGTGGAACTGCTTCTCCAAGTAGGAACATTCTGTGTGGCAGTTGGTGCACTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCATATCTTGAAGAGCATGTGTTTGCATTTTGGCTGACGACAGCTGGAATAATTGTCGGTGCTGTTGTTGCTTTTTTCCTTATGTATTTCTACCTCAAGGCAAGGAAAATATTTTGA 1329 0.474 MALRWPLLLRFRSQQPLLAPTNFAAFSDLAEPRAFDVPCLPSVNLLHRSNVLAPALKLKVLAPYVVKCLARSTEEKQWSDAETVVSDSDEAASEDDGNGQLRSRTSASETDRLESPRVATPSSGDSLSLGIREPVYEVVEVRSDGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNSVPSLLVREYAILLNLGSLRAIAMKDCVLIFDYNRKGGQAFLESLLPRLNPKNSNGGPSMPFELEVQALLEALPNRLTGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCTVTKGDNLVECSVPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGAVVAFFLMYFYLKARKIF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0559 442 Gene3D Magnesium transport protein CorA, transmembrane region 214 368 - -
Ahy18g0559 442 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 245 441 IPR039204 -
Ahy18g0559 442 Gene3D - 131 212 - -
Ahy18g0559 442 Coils Coil 322 342 - -
Ahy18g0559 442 MobiDBLite consensus disorder prediction 98 126 - -
Ahy18g0559 442 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 378 433 IPR045863 -
Ahy18g0559 442 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 68 245 IPR039204 -
Ahy18g0559 442 MobiDBLite consensus disorder prediction 79 126 - -
Ahy18g0559 442 CDD Mrs2_Mfm1p-like 138 441 IPR039204 -
Ahy18g0559 442 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 245 441 - -
Ahy18g0559 442 Pfam CorA-like Mg2+ transporter protein 322 436 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ahy18g0559 442 Gene3D Magnesium transport protein CorA, transmembrane region 369 440 - -
Ahy18g0559 442 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 68 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0559 Ahy-Chr18 5455124 5460406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0559 129 442 MRS2 Gene Family AT5G22830 79.228 7.61e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0559 K16075 - gmx:100807024 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0559 18 5455124 5460406 Ahy18g0559 18 5455124 5460406 ECH
Ahy18g0559 18 5455124 5460406 Ahy8g1362 8 29760288 29765549 hybridization