Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0558 ATGGCGGAGGACCGGAAGAATGAGGGAAGTGACTACAGTTCGGAGGAGGAAGGAACTGAGGATTACAGGCGCGGAGGGTACCATGCGGTTCGGATTGGGGATACATTCAAGAATGGATGCTATGTGGTTCAGAGCAAGCTTGGTTGGGGCCATTTTTCCACCGTGTGGCTCGCTTGGGACACTCAGAAATCGAGATATGTCGCCCTAAAAATTCAGAAGAGTGCTCAGCACTACACTGAAGCAGCAATGGATGAAATAAAGATTCTCAAACAAATTGCAGATGGAGATCCACATGACAATAAATGTGTTGTGAAGCTTTTGGATCACTTCAAGCATTCAGGACCTAATGGCCAGCATGTCTGTATGGTTTTTGAATTCCTTGGGGACAATCTTCTGACTCTTATCAAGTATAGTGATTATCGAGGAGTTCCCCTTCCCATAGTTAAGGAAATCTGCTTCCATATTTTGGTGGGTTTGGATTACTTGCATCGTGAGCTTTCTATAATACACACTGATTTGAAGCCGGAGAATGTCTTGCTTCTGTCACCACTGGATCCATCTAAGGATCCTAGGAAATCAGGCATTCCACTTATTGCTCCAAATACGAAGGAGAAGATCAGCAATGGGACCATAAAAGACGAAAAAAGTTTGCATGCAGATTTGACCAAGAACCAGAAAAAGAAAATGCGGAAAAAGGCTAAAAAGGCAGCTCAAGCTTGTGTTGGGATGGAAAGTCCCGAGGAAGCCGAGGAGGATGGTAAAACACCTGAGCAAGATGAATGTAGTAAAGATGTGGAACTAAGTTTAGAATCCAGTGAAGTTAATGGTTCTGTGGGCAAAGATGAATCGACAAAGGCTTCTGAAACCAAGGATGATCCCCAAGGAAGCCGTGGTCAAAGGAAATCTGAAAGAAAGAAGTTACTTGCCTCTGCTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCGTGTTGGACTTATAAACAATTCACAAACGATATTCAGACGAGGCAGTATAGATGCCCTGAAGTTATTCTCGGATCAAAATACTCAACTCCAGCAGATCTATGGTCTTTTGCGTGCATTTGCTTTGAGCTTGCGACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGACAGGGATGAGGATCATCTGGCCTTGATGATGGAGCTTCTCGGAATGATGCCCCGCAAGATTGCATTAGGTGGCCGTTATTCGCGCGAGTTTTTCAATAGATATGGTGATTTGAGGCACATCCGTCAGTTGCGGTTCTGGCCTCTTAACAAAGTACTGATGGAGAAATATGATTTCAGCGAGCAAGATGCAAATGACATGGCTGGCTTCATTATTCCATTACTGGATTTTGTCCCTGACAAGAGGCCAACAGCAGCTCAGTGCCTTACTCATCCATGGTTGAGTACAAGATCTCGGACTCTCAAACCTTCGTCCACACCTGTGCAACCGGGGGCAAAAGATGGAGAGACATTGGAAAAGACAAAGGAAAAGGCTGAGCTGGAAGCTGTGGAAGTTGGCATTGGGAATATAGCTATTGATGGAGCTCCAAAGCCAGTTGAAATGTCCCAAACTATACAACAGTTGTCAAAATAA 1617 0.4434 MAEDRKNEGSDYSSEEEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQKSRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPHDNKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPIVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSPLDPSKDPRKSGIPLIAPNTKEKISNGTIKDEKSLHADLTKNQKKKMRKKAKKAAQACVGMESPEEAEEDGKTPEQDECSKDVELSLESSEVNGSVGKDESTKASETKDDPQGSRGQRKSERKKLLASADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRQLRFWPLNKVLMEKYDFSEQDANDMAGFIIPLLDFVPDKRPTAAQCLTHPWLSTRSRTLKPSSTPVQPGAKDGETLEKTKEKAELEAVEVGIGNIAIDGAPKPVEMSQTIQQLSK* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0558 538 CDD STKc_SRPK 30 475 - -
Ahy18g0558 538 Gene3D Transferase(Phosphotransferase) domain 1 298 475 - -
Ahy18g0558 538 ProSiteProfiles Protein kinase domain profile. 41 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0558 538 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Ahy18g0558 538 Gene3D Phosphorylase Kinase; domain 1 27 126 - -
Ahy18g0558 538 MobiDBLite consensus disorder prediction 1 20 - -
Ahy18g0558 538 SUPERFAMILY Protein kinase-like (PK-like) 36 488 IPR011009 -
Ahy18g0558 538 MobiDBLite consensus disorder prediction 206 305 - -
Ahy18g0558 538 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 537 - -
Ahy18g0558 538 Pfam Protein kinase domain 41 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0558 538 Pfam Protein kinase domain 308 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0558 538 MobiDBLite consensus disorder prediction 283 305 - -
Ahy18g0558 538 SMART serkin_6 41 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g0558 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Ahy18g0558 538 Gene3D Transferase(Phosphotransferase) domain 1 95 185 - -
Ahy18g0558 538 MobiDBLite consensus disorder prediction 207 223 - -
Ahy18g0558 538 PANTHER SERINE KINASE-LIKE PROTEIN 9 537 - -
Ahy18g0558 538 Coils Coil 219 239 - -
Ahy18g0558 538 MobiDBLite consensus disorder prediction 268 282 - -
Ahy18g0558 538 MobiDBLite consensus disorder prediction 480 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0558 Ahy-Chr18 5451017 5454483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0558 5 525 EF-hand Containing Proteins AT5G22840 69.549 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Ahy18g0558 Pkinase 8.60E-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0558 K08832 - gmx:100809984 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0558 18 5451017 5454483 Ahy18g0558 18 5451017 5454483 ECH
Ahy18g0558 18 5451017 5454483 Ahy8g1361 8 29753239 29756697 hybridization